Gene Rpic_2870 details

Gene Information

• Locus tag: Rpic_2870
• Symbol: dnaK
• ID: 6289248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: -
• Start bp: 2974867
• End bp: 2976819
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642626440
• Product: molecular chaperone DnaK
• Protein accession: YP_001900425
• Protein GI: 187929938
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCAAAA TCATCGGTAT CGACTTGGGT ACCACCAATA GCTGCGTCGC CATCATGGAG 
GGCAACACCC CCAAGGTGAT CGAGAATGCG GAAGGCGCTC GCACCACCCC GTCGATCATC 
GCCTACATGG AAGATGGCGA GATCCTGGTC GGTGCCCCGG CCAAGCGCCA GGCGGTGACC 
AACCCGAAGA ACACGCTGTA CGCCGTCAAG CGCCTGATCG GCCGCAAGTT TGAAGAGAAG 
GAAGTCCAGA AGGACATCGG CCTGATGCCG TATTCCATCG TCAAGGCCGA CAACGGCGAC 
GCCTGGGTGG AAGTGCGCGG CCAGAAGCTG GCACCGCCGC AAATCTCAGC CGAAACCCTG 
CGCAAGATGA AGAAGACCGC CGAGGACTAC CTGGGCGAGG AAGTGACCGA AGCCGTGATC 
ACGGTGCCGG CCTACTTCAA CGATTCGCAG CGCCAGGCCA CCAAGGACGC CGGCCGCATT 
GCCGGTCTGG ACGTCAAGCG CATCATCAAC GAGCCGACCG CGGCTGCGCT GGCATTCGGC 
CTGGACAAGA ACGAGAAGGG CGACCGCAAG ATCGCCGTGT ATGACCTGGG CGGCGGTACG 
TTCGACATCT CGATCATCGA GATTGCCGAC GTGGACGGCG AGAAGCAGTT CGAAGTGCTG 
TCGACCAACG GCGACACGTT CCTGGGCGGC GAAGACTTCG ACCAGCGCAT CATCGATTAC 
ATCATCGGCG AGTTCAAGAA GGAGCAGGGC GTCGACCTGT CGAAGGACGT GCTCGCACTG 
CAACGCCTGA AGGAAGCCGC TGAAAAGGCC AAGATCGAGC TGTCGAGCAC GCAGCAGACT 
GAAATTAACC TGCCGTACAT CACGGCGGAT GCCTCGGGCC CGAAGCACTT GAACCTGAAG 
ATCACGCGCG CCAAGCTCGA AGCGCTGGTC GAAGACCTGA TCGCCCGTAC GATCGATCCG 
TGCCGCACCG CCATCAAGGA TGCTGGCGTG AAGGTGTCGG ACATCCACGA CGTGATCCTG 
GTGGGCGGCA TGACGCGCAT GCCGAAGGTG CAGGAGAAGG TGAAGGAGTT CTTCGGCAAG 
GAAGCCCGCA AGGACGTGAA CCCGGACGAG GCCGTTGCCG TGGGCGCTGC CATCCAGGGT 
CAGGTGCTGG GCGGTGACCG TACCGACGTG CTGCTGCTGG ACGTGACGCC GCTGTCGCTG 
GGCATCGAAA CGCTGGGTGG CGTGATGACC AAGATGATCG GTAAGAACAC GACCATCCCG 
ACCAAGTTCT CGCAGACCTT CTCGACCGCC GACGACAACC AGCCGGCCGT GACGATCAAG 
GTCTACCAGG GCGAGCGCGA GATGGCCTCG GGCAACAAGA TGCTCGGCGA ATTCAACCTG 
GAAGGCATTC CGCCGGCACC GCGCGGGACG CCGCAGATTG AAGTGTCGTT CGACATCGAC 
GCCAACGGCA TCCTGCATGT GGGCGCCAAG GACAAGGCGA CCGGCAAGGA AAACAAGATC 
ACCATCAAGG CAAGCTCCGG CCTGTCGGAA GCCGAGATCG AGCGCATGGT GAAGGACGCC 
GAGGCCAACG CCGAGGAAGA CAAGAAGCTG CGCGAACTGG TCGACTCCCG TAACCAGGGT 
GAAGCGCTGG TGCACTCGAC CAAGAAGGCA CTGGGCGAGT ACGGCGACAA GCTGGAAGCT 
GGCGAGAAGG ACAAGATCGA AGCCGCGATC AAGGAGCTTG AGGAGACCCT GAAGGGGACC 
GACAAGGCCG CGATCGACGC CAAGACCGAA GCGCTGGCGA CCGCCTCGCA GAAGCTGGGC 
GAGAAGGTCT ACGCCGACAT GCAGGCCAAG GGCGAGGCGG GTGGCGCTGA ACAAGCCGCT 
GGTGCCCAGG CAGGCGCGCA AGCAGGGCAA GGCGCACCGC ACGACGATAA CGTCGTCGAT 
GCCGAGTTCA AGGAAGTGAA CGACAAGAAG TAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAIME GNTPKVIENA EGARTTPSII AYMEDGEILV GAPAKRQAVT 
NPKNTLYAVK RLIGRKFEEK EVQKDIGLMP YSIVKADNGD AWVEVRGQKL APPQISAETL 
RKMKKTAEDY LGEEVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAFG 
LDKNEKGDRK IAVYDLGGGT FDISIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDY 
IIGEFKKEQG VDLSKDVLAL QRLKEAAEKA KIELSSTQQT EINLPYITAD ASGPKHLNLK 
ITRAKLEALV EDLIARTIDP CRTAIKDAGV KVSDIHDVIL VGGMTRMPKV QEKVKEFFGK 
EARKDVNPDE AVAVGAAIQG QVLGGDRTDV LLLDVTPLSL GIETLGGVMT KMIGKNTTIP 
TKFSQTFSTA DDNQPAVTIK VYQGEREMAS GNKMLGEFNL EGIPPAPRGT PQIEVSFDID 
ANGILHVGAK DKATGKENKI TIKASSGLSE AEIERMVKDA EANAEEDKKL RELVDSRNQG 
EALVHSTKKA LGEYGDKLEA GEKDKIEAAI KELEETLKGT DKAAIDAKTE ALATASQKLG 
EKVYADMQAK GEAGGAEQAA GAQAGAQAGQ GAPHDDNVVD AEFKEVNDKK