| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2858 |
|---|
| Symbol | |
|---|
| ID | 6288113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2962773 |
|---|
| End bp | 2963828 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626428 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_001900413 |
|---|
| Protein GI | 187929926 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.693195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTT CCGATACCCC ATCCGCATCG ACCGGCCTGT CTTACCGCGA CGCGGGCGTC
GACATCGAGG CGGGTGACGC CCTTGTCGAC CGCATCAAGC CGTTTGCCAA GCGCACCATG
CGCGAAGGCG TGCTGGGCGG CATCGGCGGC TTCGGCGCGC TGTTCGAGCT GTCCAAGAAG
TATCAGGAGC CGGTGCTGGT GTCCGGTACC GACGGCGTGG GCACCAAGCT CAAGCTGGCC
TTTGCGTTGA ATCGCCACGA CACGGTTGGC CAGGATCTGG TCGCCATGAG CGTGAACGAC
ATCCTGGTGC AGGGCGCCGA GCCGCTGTTC TTCCTGGATT ACTTCGCCTG CGGCAAGCTC
GACGTCGACA CCGCTGCCAC CGTGGTCAAG GGCATCGCCC AGGGTTGCGA GTTGGCCGGC
TGCGCGCTGA TCGGCGGCGA AACCGCTGAA ATGCCGAGCA TGTACCCGGA CGGCGAATAC
GACCTGGCCG GCTTTGCCGT CGGCGCCGTC GAAAAGCGCA AGATCATCGA CGGCACGACC
ATTGCCGAGG GCGACGTGGT GCTGGGCCTG GCTTCGTCGG GTGCGCATTC GAACGGCTAC
TCGCTGGTGC GCAAGATCAT CGAAGTATCG CGCCCGGACT TGAACGCCGA TTTCCACGGC
CAGCGCCTGC AGGACGCCAT CATGGCGCCG ACGCGCATCT ACGTGAAGCC GCTGCTGGCA
TTGATGGAGA AGCTGACCGT CAAGGGCATG GCGCACATCA CCGGCGGTGG TTTGACCGAA
AACGTGCCGC GCGTGCTGCA AGACAACCTG ACCGCCGTGC TGCACAAGAG CGCCTGGACG
CTGCCGCCGC TGTTCCAGTG GCTGCAGAAG GCCGGCAACG TGGCCGATGA CGAAATGCAT
CGCGTGTTCA ATTGCGGCAT CGGCATGGTG GTGATCGTGT CGGCAGCCGA TGCACCGGCC
GCGATCGCGC ACCTGAAGGA CGCGGGCGAG ACGGTCTACC AGATTGGCGA AATCCGCGCA
CGCCAAGCCG GCGAAGCGCA GACGATCGTG GTCTGA
|
|---|
| Protein sequence | MSASDTPSAS TGLSYRDAGV DIEAGDALVD RIKPFAKRTM REGVLGGIGG FGALFELSKK
YQEPVLVSGT DGVGTKLKLA FALNRHDTVG QDLVAMSVND ILVQGAEPLF FLDYFACGKL
DVDTAATVVK GIAQGCELAG CALIGGETAE MPSMYPDGEY DLAGFAVGAV EKRKIIDGTT
IAEGDVVLGL ASSGAHSNGY SLVRKIIEVS RPDLNADFHG QRLQDAIMAP TRIYVKPLLA
LMEKLTVKGM AHITGGGLTE NVPRVLQDNL TAVLHKSAWT LPPLFQWLQK AGNVADDEMH
RVFNCGIGMV VIVSAADAPA AIAHLKDAGE TVYQIGEIRA RQAGEAQTIV V
|
|---|
| |