| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2830 |
|---|
| Symbol | |
|---|
| ID | 6287502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2938618 |
|---|
| End bp | 2939544 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642626400 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001900385 |
|---|
| Protein GI | 187929898 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.998909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.750819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAC CAAGCTCGAT CAAGCACTAC CTGCAGTTCA AGGACTTTTC TCTGGAAGAG
TACGAATACC TGCTGGACCG TTCCGCGATC CTCAAGGCCA AGTTCAAGAA CTACGAGACG
TGGCACCCGC TGCACGACCG CACGCTGGCC ATGATCTTCG AGAAGAATTC CACGCGTACG
CGCCTGTCGT TCGAAGCCGG CATTCACCAG CTCGGCGGTC ACGCAGTCTT CCTGAATACG
CGCGATTCCC AGCTTGGGCG CGGTGAGCCG ATCGAAGACG CGGCGCAGGT CATCTCCCGC
ATGACCGACA TCATCATGAT CCGCACCTTC GGGCAGGAGA TCATCGAGCG CTTTGCTGCG
CATTCGCGCG TGCCGGTCAT CAACGGGCTG ACCAACGAAT ACCACCCGTG CCAGGTGCTG
GCCGACATCT TTACCTTCAT CGAGCAGCGC GGCCCCATCA AGGGCAAGAC CGTCACCTGG
GTGGGCGATG CCAACAACAT GGCCTACACG TGGGTCCAGG CGGCGGAGAT TCTCGGCTTC
CGCTTCCATT TTTCTGCGCC GAAGGGCTAT CAGCTGGATC CGGCCATGGT GGCCGATTCC
GCCTTGCCGT TCGTGCATGT GTTCGAAAAC CCGCTCGAAG CCTGCGACGG CGCGCATCTG
GTGACCACGG ACGTGTGGAC CAGCATGGGC TACGAAGCTG AAAACGAAGC GCGCAAGAAG
GCCTTTGGCG ACTGGATGGT CACCGAGGCG ATGATGCAGC GCGCGCAACC CGATGCGCTG
TTCATGCACT GCCTGCCCGC TCACCGCGGC GAGGAAGTCG AAGCGGCCGT CATCGACGGC
AAGCAGAGCG TCGTGTGGGA CGAGGCGGAA AACCGCCTGC ACGTGCAGAA GGCGCTGATG
GAATATCTGC TCTGCGGTCG CTACTGA
|
|---|
| Protein sequence | MNPPSSIKHY LQFKDFSLEE YEYLLDRSAI LKAKFKNYET WHPLHDRTLA MIFEKNSTRT
RLSFEAGIHQ LGGHAVFLNT RDSQLGRGEP IEDAAQVISR MTDIIMIRTF GQEIIERFAA
HSRVPVINGL TNEYHPCQVL ADIFTFIEQR GPIKGKTVTW VGDANNMAYT WVQAAEILGF
RFHFSAPKGY QLDPAMVADS ALPFVHVFEN PLEACDGAHL VTTDVWTSMG YEAENEARKK
AFGDWMVTEA MMQRAQPDAL FMHCLPAHRG EEVEAAVIDG KQSVVWDEAE NRLHVQKALM
EYLLCGRY
|
|---|
| |