Gene Rpic_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2813 
Symbol 
ID6286345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2921782 
End bp2922813 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID642626384 
ProductBile acid:sodium symporter 
Protein accessionYP_001900369 
Protein GI187929882 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC CGCTGTTGTC TCCGTTGTTG TCCCAGATCG ATGGGTTCAT CCGCGCCATG 
CTCGTGATGG TCGCGCTCGC CCTTTTCTTC CCGGCGCTTG GCGCGAGCGA CGGCCCGCTG
CGGCTGGACA TCGTCACCAT CGTCGGCGTG TCGCTGGTGT TCTTCCTGCA CGGCGCGGCG
CTCTCCCGCG AGAAGATCGT CGAAGGCGCG CGCAACTGGC GCCTGCATCT GTTCGTGCAG
AGCTGCACCT TCATCCTGTT TCCGCTGATC GGCGCGGTCA TCCTGTTTGC GTGCAAGCCG
TTCATTCCGG CTGAACTGCT GCTGGGCGTG TTCTACCTGT GCGCGCTGCC ATCCACGGTG
TCGTCGTCGG TGGCGATGAC GGCGATGGCC AAGGGCAACG TGCCGGCCGC CATCTTCAAT
GCGACCATCT CGGGCCTGAT CGGCATGATC GCCACGCCGC TGCTAATGAG CTTCGTGATC
CAGGCGTCGG GCGCGGACCT GTCGGTCGGC AAGGCGCTGC TGGGCGTGGC CGAGCAACTG
CTGCTGCCGT TCGTGCTAGG CCAGTTGCTG CGGCCCGTGC TGGGGGGCTT CATCAACAAG
CACAAGCCGA TCATCAACAA AGTGGATCGC GCGGTGATCC TGCTGATCGT CTTCAACTCG
TTTGCTGATT CGACGCACGC GGGTGTGTGG TCGAAGTATC CGTGGGAAAC CATCGTGGCC
GTGGCCGTGA TGAGCGGCGC GCTGCTCTTC GTCGTGCTGG GCGCGACGAC TTGGCTGTCG
CGGCGCGCGG GCTTCAACCT GGCCGACGAA ATCACCGCCG TGTTCTGCGG CTCGAAGAAG
AGCCTGGCGA ACGGCGTGCC GATGGCGAAG ATCCTGTTTG CCGGCAACCC TGCGCTCGGC
CTGATCGTGC TGCCGCTGAT GATCTTTCAC CAGTTGCAGC TCATCGTGTG TTCGACGCTG
GCGCGCAAAT ACGCCGATCG CGTTGCCCAC GCAGAGGCCA GCGCGGGGGT CCCGGCGAGC
CGCCCGGCTT GA
 
Protein sequence
MKIPLLSPLL SQIDGFIRAM LVMVALALFF PALGASDGPL RLDIVTIVGV SLVFFLHGAA 
LSREKIVEGA RNWRLHLFVQ SCTFILFPLI GAVILFACKP FIPAELLLGV FYLCALPSTV
SSSVAMTAMA KGNVPAAIFN ATISGLIGMI ATPLLMSFVI QASGADLSVG KALLGVAEQL
LLPFVLGQLL RPVLGGFINK HKPIINKVDR AVILLIVFNS FADSTHAGVW SKYPWETIVA
VAVMSGALLF VVLGATTWLS RRAGFNLADE ITAVFCGSKK SLANGVPMAK ILFAGNPALG
LIVLPLMIFH QLQLIVCSTL ARKYADRVAH AEASAGVPAS RPA