| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2811 |
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| Symbol | |
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| ID | 6286072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2919993 |
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| End bp | 2920751 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642626382 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001900367 |
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| Protein GI | 187929880 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.411442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATTC GCGATCAGGT ATTCATCGTC ACCGGCGGCG CGTCGGGACT GGGCGCAGGC
ACGGCACGCA CGTTGGCCGA GGCCGGCGGC AACGTGGTGA TTGCAGACCT GAACGAGGCC
GCCGGCACGG CGCTGGCGCA GGAACTGGGC GGTCGCTTCG TGCGCTGCGA TGTCACGTCC
GAAGCGGACG GGCAAGCCGT TGTGGACGCC GCCACATCGC TGGGCACGCT GCGCGGGCTG
GTGAACTGCG CAGGGATTGC AACGGCGTCG CGCACGGTGG GCAAGACGGG GCCGCACCCG
CTGGACCAGT TCGCACGCGT GATCAACATC AATCTGATCG GCACCTTCAA CATGATCCGC
CTGGCCGCGA CGGCCATGGC CGGCAACACA CCCAACGCCG GCGGCGAGCG CGGCGTGATC
ATCAACACGG CATCGGTGGC TGCGTTTGAC GGGCAGATTG GTCAGGCGGC CTACGCGGCG
TCCAAGGGCG GCGTGGTGGC GATGACGCTG GCGATTGCAC GTGACCTGTC GCGTGACGGC
ATCCGCGTGA TGACGATTGC GCCGGGCATT TTCGAAACGC CGATGCTGCT CGGCATGCCG
GCCGAAGTAC AGGACGCGCT GGGCAAGATG GTGCCGTTCC CACCGCGCCT GGGTAAGCCG
TCGGAATATG CGCAGCTCGC GCGTGCGATC GTTGAGAACC CGATGCTCAA TGGTGAGACC
ATCCGCCTGG ATGGCGCCAT CCGCATGCAG CCGAAGTAA
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| Protein sequence | MEIRDQVFIV TGGASGLGAG TARTLAEAGG NVVIADLNEA AGTALAQELG GRFVRCDVTS
EADGQAVVDA ATSLGTLRGL VNCAGIATAS RTVGKTGPHP LDQFARVINI NLIGTFNMIR
LAATAMAGNT PNAGGERGVI INTASVAAFD GQIGQAAYAA SKGGVVAMTL AIARDLSRDG
IRVMTIAPGI FETPMLLGMP AEVQDALGKM VPFPPRLGKP SEYAQLARAI VENPMLNGET
IRLDGAIRMQ PK
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