| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2775 |
|---|
| Symbol | |
|---|
| ID | 6286431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2886853 |
|---|
| End bp | 2887785 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626346 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_001900331 |
|---|
| Protein GI | 187929844 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCT CCGATGTGCT CGAACTCCTC ACGCTGGCTG CCCTATGGGG CGGCTCCTTC
CTGTTCATGC GCGTGGCAGC GCCGCCCTTT GGGCCCGTTG CGCTCATCGC GCTGCGAGTG
GCGATTGCCT CGTGCTTCCT CGTCCCAATG CTCACCTTGC GCGGCGGCAT GGGCGCGCTG
CGCACGCACT GGCCGCATCT GCTGGCCGTG GGCGTGCTGA ACTCGGCCAT CCCGTTCTGC
CTGTTCGCCT ATGCCGAACT CACGCTCACG GCGGGCTTCA CCTCGGTGCT CAATGCGGCG
GCCCCGTTGT TTGCGGCCAT CGTTGCGTTC ACGTGGCTCG GTGAGCGGAT GTCGTCGCTG
CGCGTGCTGG GATTGGCGAT CGGCTTCATC GGCGTCATCG TGCTGGTGGG CGGGTCGTCT
GTCATCGACG CAAAACAAGG CGGCGTGGCG GTGGCCGCGG CGCTGTCCGC CACCGTGCTG
TACGGCGTGG CCAGCAGCTA CACCAAGCGC TTCCTGACCG GCGTGCCGCC GCTGGCCGTG
GCAACCGGCA GCCAATTGGG CGCCGCCATC GTGCTCGCAC CGCTGGCCTA CTGGCTGTGG
CCCGCGCAAA CGCCCACCGG CAGCGTGTGG CTGCACGTCA TTGCACTGGG TATCGCATGC
ACGGGCGTGG CTTACATCCT CTTCTTCCGA CTCGTCGCGC ACGTGGGGCC GACGCGCGCG
GTATCGGTCA CCTTCCTGAT CCCGGTGTTT GGCGTGCTGT GGGGCATCCT GTTCCTGGGC
GAGCAACTGA CGCTCAACAT GGTGATCGGC TGCGCCGTCA TCCTGCTCGG CGCGTCGCTC
TCGACCGGCG TGTTCGCTCC GGGAAAAAAG GCCCCTGCAA ATGCAGCGAC CACAGCAAAC
GAGAAGGATC CGCTGTTGCG TTCCGGCCGC TGA
|
|---|
| Protein sequence | MRRSDVLELL TLAALWGGSF LFMRVAAPPF GPVALIALRV AIASCFLVPM LTLRGGMGAL
RTHWPHLLAV GVLNSAIPFC LFAYAELTLT AGFTSVLNAA APLFAAIVAF TWLGERMSSL
RVLGLAIGFI GVIVLVGGSS VIDAKQGGVA VAAALSATVL YGVASSYTKR FLTGVPPLAV
ATGSQLGAAI VLAPLAYWLW PAQTPTGSVW LHVIALGIAC TGVAYILFFR LVAHVGPTRA
VSVTFLIPVF GVLWGILFLG EQLTLNMVIG CAVILLGASL STGVFAPGKK APANAATTAN
EKDPLLRSGR
|
|---|
| |