Gene Rpic_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2729 
Symbol 
ID6289605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2844930 
End bp2845508 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID642626301 
Productprotein of unknown function DUF218 
Protein accessionYP_001900286 
Protein GI187929799 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00326918 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCG GTCGTTCCGC AGTTCGCAAT GTTCTCGCCT GGATTGGCGG TTGCGCCATC 
GTGGCGGTGG TGGTCGGAGG TGCGCTCGTG TGTGGGGCGA AGGCATGGCT GCGCGAGGAG
CCGAGGCTCG CACAGGCGGA CGTGATCGTC GTGCTGGGCG GCGAATCGGG CCAGCGCGTG
ATCGGCGCCG CCGAGCTGTA CCACGCGGGC GTTGCTCCCC GCGTGTTCGT CAGCGGGCAG
GGCGATTGCC TGCTGATCGA ACGTCGCCTG GTGATGGCGG GTGTGCCCGC AGAGCGCATC
GGCCACGAAT GTGTGTCTGG CAGCACGATG GAAAATGCGC GGATGACGCG CGGGACGCTA
GCGGGCCAGC AGGTGCAAAG CGCAATACTG GTCACGAGCT GGTATCACAC CGGCCGGGCG
CTGGCGGTGT TCCGCAAGGT ATGGCCGGAG GTCACCTGGG GTGCGCAGGG CGTATTCCCG
GGCGACACGC TGGCCAAGTC GGTCCCGATC TACGAAGCCG GGTCGATTCT TGCGGAGTAC
GTCAAGCGGG CGTGGTATGC CGTCCGCTAC CGGGCCTGA
 
Protein sequence
MVFGRSAVRN VLAWIGGCAI VAVVVGGALV CGAKAWLREE PRLAQADVIV VLGGESGQRV 
IGAAELYHAG VAPRVFVSGQ GDCLLIERRL VMAGVPAERI GHECVSGSTM ENARMTRGTL
AGQQVQSAIL VTSWYHTGRA LAVFRKVWPE VTWGAQGVFP GDTLAKSVPI YEAGSILAEY
VKRAWYAVRY RA