Gene Rpic_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2726 
SymbolileS 
ID6288807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2841138 
End bp2844017 
Gene Length2880 bp 
Protein Length959 aa 
Translation table11 
GC content64% 
IMG OID642626298 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001900283 
Protein GI187929796 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CCAAGAAGCC TACGCCGGAG AAGAGCAAAT ACCCGGTCAA CCTGCTGGAC 
ACGCCCTTCC CCATGCGCGG CGACCTGCCC AAGCGCGAAC CGCTGTGGGT CAAGCAATGG
CAGGACAAGC AGCTCTACAA GAAGATCCGT GCTGCTCGTA AAGGCGCGAA GAAGTTCATC
CTTCACGACG GCCCGCCGTA TGCCAACGGC GATCTGCACA TCGGCCACGC GGTCAACAAG
ATCCTCAAGG ACATGGTGAT CAAGGCGCGC GGCCTGACCG GGCTGGACGC CGTCTATGTG
CCGGGCTGGG ACTGCCACGG CATGCCGATC GAGATCCAGA TCGAAAAGCA GTTCGGCAAG
GGTCTGCCCG TCAAGGAAGT GCAGGAGAAG GCGCGCGCCT ACGCCACGGG GCAGATCGCG
CGCCAGAAGG CCGATTTCGA GCGACTGGGC GTGCTGGGTG ACTGGGCCGA TCCCTATCTG
ACCATGAACT TCCGCAACGA AGCGGATGAA GTGCGTGCGC TGGGCAAGAT CCTGGAGAAA
GGCTACGTCT TCCGCGGCCT GAAGCCGGTC AACTGGTGCT TCGACTGCGG CTCGGCACTG
GCTGAGGCGG AAGTCGAATA CGCGGATCGC ACCGACCTGT CGATCGACGT CGGCTTCCCA
TTTGCCGATA TCGACGCACT GGCGAGCGCC TTCCACGTCG GCGCCGATGT GCTCAAGGCC
AAGCCGGGCT GGATCGTGAT CTGGACGACC ACGCCGTGGA CGATCCCCTC CAACCAGGCG
CTGAACCTGC ACCCGGAAAT CGAATACGCG CTGGTCGACA CGTCGCGCGG GCTGCTGATC
GTTGCCAAGG AGCGCGTCGA AGCCTGCCTG CAAAGCTGGA AGCTGGAAGG CACCGTGCTG
GCCACGTGCG AAGGCGCAGC GCTCAATGGC GTGCGTTTCC ATCATCCGCT CGCCAAGATG
GACGCGGGCT ACGATCGCAC CTCGCCCGTC TACCTGGGCG ACTACGTGAC CATCGACACC
GGTACCGGCA TCGTCCACTC CGCGCCCGCC TACGGCGTGG AAGACTTCCA GTCGTGCAAG
GCACACAACA TGCCCGACTC GGAAATCATC AACCCGGTGA TGGGTAACGG CGTGTACGCA
TCGACGCTGC CGCTGTTCGG CGGGCAGATG ATCTGGGACG CCAATCCGAA GATCGTCGAA
GTGCTGCGCG AATCCGGCAA CCTGTTCGAC GCGCACAAGT ACGCGCACAG CTACATGCAC
TGCTGGCGCC ACAAGACGCC GATCATCTAT CGCGCCACGT CGCAGTGGTT TGCAGGGATG
GACGTGCAGC CCAACGACGG CAACGCCACG CTGCGCGAAA CGGCGCTGGC AGGCATCGAT
GCCACGGCGT TCTACCCGTC GTGGGGCAAA CAGCGCCTGC ACAACATGAT CGCCAACCGC
CCGGACTGGA CGCTGTCGCG CCAGCGCCAA TGGGGCGTGC CGATGGCCTT CTTCGTGCAC
AAGGAAACCG GCGCACTGCA CCCGCGCACG CCTGAGCTGC TGGAACAGGT CGCCCAGCGC
ATCGAAAAAA GCGGCATCGA AGCCTGGCAG ACGCTCGACC CGCGCGAGCT GCTCGGCGAC
GAGGCTGACA TGTACGAGAA GAATCGCGAC ACGCTCGACG TGTGGTTCGA CTCGGGCACC
ACGCACTGGC ACGTCATCCG CGGCTCGCAC GCGGCGGACC TGTACGACGC TTCGGCCGAC
CTGCCGGACG GTCGCCTGGC CGATCTGTAC CTGGAAGGTT CCGACCAGCA CCGTGGCTGG
TTCCATTCGT CGCTGCTGAC GGCCTCGATG CTGTACGGCA AGCCGCCATA CAAGGGCCTG
CTCACACACG GCTTCACGGT GGACGGCGAA GGCCGCAAGA TGTCCAAGTC GATCGGCAAC
ACGATCGCGC CGCAGGAAAT CGCCAACAAG ATGGGCGCCG AGATCATCCG CCTGTGGGTG
GCCTCGACCG ACTACTCGGG CGAACTGGCC ATCTCGGATG AAATCCTGAA GCGCGTGGTG
GAAGGCTATC GCCGCATCCG CAACACGCTG CGCTTCCTGC TCGCCAATCT GACCGACTAC
GACCACGCCA AGCACGCGCT GCCGACCGAG CAATGGCTCG AAATCGACCG CTACGCGGTA
GCGCTGACGG ATGCGTTGCA GAAGGAAGTC CTGTCGCACT ACGACGTGTA TGAATTCCAC
CCGGTGGTCG CCAAGCTGCA GACGTTCTGC TCGGAAGACC TGGGCGGCTT CTACCTCGAC
GTGCTGAAGG ACCGCCTGTA CACCACGGCG CCCGATTCCG TGGCACGCCG CTCGGCACAG
AACGCGCTGT ATCACATCAC CCAGGCCATG CTGCACTGGA TGGCGCCGTT CCTGTCGTTC
ACGGCCGAAG AGGCCTGGCA GGTGTTTGCG CACGGCACGG AGCACACCGA CACCATCTTC
ACCAGCACGT ATTACAACGC TCCGGTGCCG CAAGGCGCCA GCGCGCTGCT GGAGAAATGG
GCCGCCATCC GCAACGTGCG CGGCGAAGTG ACCAAGCAGC TGGAGGCGCT GCGTATCGAC
GGCAAGATCG GCTCGTCGCT GCAGGCGGAA GTGACGGTGT CGGCGGGTGA ATCCGTGCAT
GACGCACTGG CCAGCCTCGG CGACGACCTG CGCTTCGTGC TGATCACGTC CGCGGCCAAG
CTGGAGCGCG CGCCGGAAGG CGGCGATCTG CTCATCACCG TGGTGCCGTC CACGCACTCC
AAATGCGAGC GCTGCTGGCA TTACCGCGCC GACGTCGGCC ACGATCACGC CCACCCGACC
CTCTGCAAGC GCTGCACCGA CAACCTGTTC GGTTCCGGCG AACAACGGAG CGCTGCCTGA
 
Protein sequence
MSDSKKPTPE KSKYPVNLLD TPFPMRGDLP KREPLWVKQW QDKQLYKKIR AARKGAKKFI 
LHDGPPYANG DLHIGHAVNK ILKDMVIKAR GLTGLDAVYV PGWDCHGMPI EIQIEKQFGK
GLPVKEVQEK ARAYATGQIA RQKADFERLG VLGDWADPYL TMNFRNEADE VRALGKILEK
GYVFRGLKPV NWCFDCGSAL AEAEVEYADR TDLSIDVGFP FADIDALASA FHVGADVLKA
KPGWIVIWTT TPWTIPSNQA LNLHPEIEYA LVDTSRGLLI VAKERVEACL QSWKLEGTVL
ATCEGAALNG VRFHHPLAKM DAGYDRTSPV YLGDYVTIDT GTGIVHSAPA YGVEDFQSCK
AHNMPDSEII NPVMGNGVYA STLPLFGGQM IWDANPKIVE VLRESGNLFD AHKYAHSYMH
CWRHKTPIIY RATSQWFAGM DVQPNDGNAT LRETALAGID ATAFYPSWGK QRLHNMIANR
PDWTLSRQRQ WGVPMAFFVH KETGALHPRT PELLEQVAQR IEKSGIEAWQ TLDPRELLGD
EADMYEKNRD TLDVWFDSGT THWHVIRGSH AADLYDASAD LPDGRLADLY LEGSDQHRGW
FHSSLLTASM LYGKPPYKGL LTHGFTVDGE GRKMSKSIGN TIAPQEIANK MGAEIIRLWV
ASTDYSGELA ISDEILKRVV EGYRRIRNTL RFLLANLTDY DHAKHALPTE QWLEIDRYAV
ALTDALQKEV LSHYDVYEFH PVVAKLQTFC SEDLGGFYLD VLKDRLYTTA PDSVARRSAQ
NALYHITQAM LHWMAPFLSF TAEEAWQVFA HGTEHTDTIF TSTYYNAPVP QGASALLEKW
AAIRNVRGEV TKQLEALRID GKIGSSLQAE VTVSAGESVH DALASLGDDL RFVLITSAAK
LERAPEGGDL LITVVPSTHS KCERCWHYRA DVGHDHAHPT LCKRCTDNLF GSGEQRSAA