Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2694 |
Symbol | |
ID | 6287537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2806454 |
End bp | 2808313 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642626267 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001900252 |
Protein GI | 187929765 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAT ACCGTTCCAA AACCTCCACC GCCGGCCGCA ACATGGCGGG GGCACGCTCG CTCTGGCGCG CCACCGGCAT GAAAGACGAA GATTTCCAGA AGCCGATCAT TGCGGTGGTC AACTCGTTCA CCCAGTTCGT TCCTGGCCAC GTGCACCTGA AAGACCTGGG GCAGCTCGTC GCGCGCGAGA TCGAAGCCGC GGGTGGTGTG GCCAAGGAAT TCAACACGAT TGCCGTGGAT GACGGCATCG CCATGGGCCA CGACGGCATG CTGTATTCGC TGCCCAGCCG CGACATCATT GCCGACTCGG TGGAATACAT GGTCAACGCG CACTGCGCCG ATGCCATGGT GTGCATCTCC AACTGCGACA AGATCACCCC GGGCATGCTG ATGGCCGCCA TGCGCCTGAA CATTCCGGTG ATCTTCGTCT CGGGGGGCCC GATGGAAGCG GGCAAGACGC GCCTGGCCAA CCCCGTCACC AAAGCCATCG AGATCAAGAA GCTGGATCTG ATCGACGCGA TGGTGATCGC GGCCGACAGC AAGTATTCCG ACGAGGAAGT GGCGGAAGTC GAGCGCTCCG CGTGCCCGAC CTGCGGTTCG TGCTCGGGCA TGTTCACGGC CAACTCGATG AACTGCCTGA CCGAAGCGCT CGGCCTGTCG CTGCCGGGCA ACGGCACCGT GGTCGCCACG CACGCAGACC GCGAGCAGCT CTTCAAGCGC GCCGGCCGCC GCATCGTTGA ACTCGCCCGC CAATACTACG AGCAGGAAGA CGAGCGCGTG CTGCCGCGCT CGGTCGGTTT CAAGGCGTTC GAAAATGCGA TGACGCTCGA CATCGCGATG GGCGGCTCGA CCAACACGAT CCTGCACCTG CTGGCCATCG CGCAGGAAGC GGAGATCGAC TTCACGATGG CGGACATCGA CCGCCTTTCG CGCGTCGTGC CGCAGCTGTG CAAGGTCGCG CCGAACACAA ACAAGTACCA CATCGAAGAC GTGCACCGCG CCGGCGGCAT CATGGCCATC CTGGGTGAGC TGGATCGTGC CGGCAAGCTG CACACCGACG CGCCCACCGT GCACGCGCCC ACGTTGAAGG ACGCGCTGGA CCAGTGGGAC ATCGTCCGCA CGTCGGATGA AGCTGTGCAG ACGTTCTACC GTGCCGGCCC GGCGGGTATC CCGACGCAGG TCGCCTTCAG CCAGAACACG CGCTGGCCGA GCCTGGATCT GGACCGCGCC GAAGGCTGCA TCCGCTCGAA CGAGCATGCG TTCTCGAAGG AAGGCGGCCT GGCCGTGCTG AGGGGCAATA TCGCGCTGGA CGGCTGCGTG GTCAAGACCG CCGGGGTGGA CGAAAGCATC CTCGTGTTCG AAGGCACGGC GCACGTGACG GAATCGCAGG ACGAAGCGGT CGCGAACATC CTCGCCGACA AGGTCAAGGC CGGCGACGTG GTGGTCGTGC GCTATGAAGG CCCGAAGGGC GGCCCCGGCA TGCAGGAAAT GCTGTACCCG ACGAGCTACA TCAAGTCCAA GGGCCTCGGC AAAGCCTGTG CGCTGCTGAC GGACGGCCGC TTCTCCGGCG GTACCTCGGG GCTGTCGATT GGTCACTGCT CGCCGGAAGC GGCTGCGGGC GGCGCGATCG GCTTGGTGCG CAACGGTGAC AAGATCCGCA TCGACATCCC CAACCGCACG ATCAACGTGC TGGTGTCGGA TGAAGAACTC GCGCGTCGCC GCGAAGAGCA GAACGCCAAG GGCTGGAAGC CCGCGCAGCC GCGTCCGCGC AAGGTGTCGG CCGCGCTCAA GGCGTACGCC AAGCTGGTCA TGTCGGCGGA CAAGGGCGCG GTGCGCGACC TGTCGCAACT GGACGACTGA
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Protein sequence | MPAYRSKTST AGRNMAGARS LWRATGMKDE DFQKPIIAVV NSFTQFVPGH VHLKDLGQLV AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRDII ADSVEYMVNA HCADAMVCIS NCDKITPGML MAAMRLNIPV IFVSGGPMEA GKTRLANPVT KAIEIKKLDL IDAMVIAADS KYSDEEVAEV ERSACPTCGS CSGMFTANSM NCLTEALGLS LPGNGTVVAT HADREQLFKR AGRRIVELAR QYYEQEDERV LPRSVGFKAF ENAMTLDIAM GGSTNTILHL LAIAQEAEID FTMADIDRLS RVVPQLCKVA PNTNKYHIED VHRAGGIMAI LGELDRAGKL HTDAPTVHAP TLKDALDQWD IVRTSDEAVQ TFYRAGPAGI PTQVAFSQNT RWPSLDLDRA EGCIRSNEHA FSKEGGLAVL RGNIALDGCV VKTAGVDESI LVFEGTAHVT ESQDEAVANI LADKVKAGDV VVVRYEGPKG GPGMQEMLYP TSYIKSKGLG KACALLTDGR FSGGTSGLSI GHCSPEAAAG GAIGLVRNGD KIRIDIPNRT INVLVSDEEL ARRREEQNAK GWKPAQPRPR KVSAALKAYA KLVMSADKGA VRDLSQLDD
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