| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2660 |
|---|
| Symbol | |
|---|
| ID | 6288278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2774180 |
|---|
| End bp | 2775136 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642626231 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001900218 |
|---|
| Protein GI | 187929731 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.166696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTC GTCTCTCTCG CCTCACCCGT CGCCTGTATG TGTGCGGCCT GTCCGCCATT
GCGCTCACGA TCGCTGCCGT ACCGGCATGT GCGGCCATTT CCGTCACAGA CGATAGCGGT
GCCATCGTTA CGCTGCAGCG CCCCGCACAA CGCATCGTCA GCCTCGCGCC GCATGCGACC
GAGTTGCTGT TCGCGGCGGG CGGCGGAGCA CGCATTGTTG GCACTGTGGC TTACAGCGAC
TACCCGCCGC CCGCGCGCGA CATTCCTCAC GTAGGCGACA ACCGCTCGCT CGATCTGGAG
CGCATCGCCG CCCTCAAACC CGATCTGGTG GTGGTCTGGC GCCACGGCAA CGCGCAGAAG
CAGATCGACC GCCTGCGCGC GCTCGGCATA CCGCTGTTCT TCTCCGAGCC GCATCGCATG
AGCGATATTC CGCGCTCGAT CGAGGCGCTC GGCACGCTGC TCGACACCCG CGCGAGCGCG
CACGATGCGG CCCAGCAATT CCGCCAACGC GCCGATACGC TGCGCCAGCG CTACGCGAGC
CGGCCGGCGG TTTCGGTGTT CTATCAGGTG TGGGAACAGC CGCTGATGAC GCTCAATGGC
CAGCACATCT TCTCTGACAT GCTCGCGTTG TGCGGCGGCC GCAATGTGTT TGCGGGAGAG
CCGTTGCTGG TGCCGACAGT CTCGCCCGAG GCGGTGATCG CAGCCAACCC GGAAGTGCTA
TTGACCGCCA GCATGGGCGC CACGCAAGGC AGCCGTCCGA TCGATACGCT CGACGCATGG
AAGCGCTGGC CGCAATTGCT CGCTGTGCAG CGCGGCAACC TTTTCAGCAT CAACGGTGAC
CTGATCAACC GCTTTGGCCC ACGCCTTGTG GAAGCCGCGA CCCTGTTGTG CGAAGACCTG
GAACAAGCCC GCATACGGCG CCTCGGTTCA CAGGCCACCA ACGGGCCGGG TCGTTAA
|
|---|
| Protein sequence | MPTRLSRLTR RLYVCGLSAI ALTIAAVPAC AAISVTDDSG AIVTLQRPAQ RIVSLAPHAT
ELLFAAGGGA RIVGTVAYSD YPPPARDIPH VGDNRSLDLE RIAALKPDLV VVWRHGNAQK
QIDRLRALGI PLFFSEPHRM SDIPRSIEAL GTLLDTRASA HDAAQQFRQR ADTLRQRYAS
RPAVSVFYQV WEQPLMTLNG QHIFSDMLAL CGGRNVFAGE PLLVPTVSPE AVIAANPEVL
LTASMGATQG SRPIDTLDAW KRWPQLLAVQ RGNLFSINGD LINRFGPRLV EAATLLCEDL
EQARIRRLGS QATNGPGR
|
|---|
| |