| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2653 |
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| Symbol | |
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| ID | 6286625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2767524 |
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| End bp | 2768795 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642626224 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001900211 |
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| Protein GI | 187929724 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.382892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.720932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGACACTCC TGACCTCGCC GCGCCGCAGG CGGGCAAGGT AGCACCCGAG
GCGGTGGCGC TGCGCGCCCA GCCGCGTCCG GTCACACGCT TGAACCGGCG CACGCTGGCC
ATCCTCGTCG GCGGCCTGTC GGTCGCCGTG CTGGGGGCCA CGATCTGGTC ATTGCAGCCG
CATCGGCGTG GCGCGGGCGA GCAGACCGAG CTGTACAACG TCGATCGCGT GTCGAAGTCC
GAAGGGCTGG ATGGCCTGCC GGCCGACTAC TCGAAGCTGC CGCCGAAGGT GCCCGAGCTG
GGGCCGCCGC TGCCGGGCGA TCTCGGCCCG GCCATCGTGA AGTCGCAGCA GCCGGTGACG
CCGACGTATG CGCCACCGGG GCACGACCCG GAGGATGCAC GGCGCAAGGA GGCTGATGCG
GCGGCGGGTT CGTCGGTGTT CTTCCGCTCG GGCAACCAGG GCAAGGCCGC CGCACCGGGA
ACAGCGCAAG CCGCTGCGGT TGCGCCTGGC AGCGCCTTGG CCGGCTTCGA CCCGCTGGCC
GCCGGGCCAG CCTCGACGGC GGCCCAGCCT GCCGACCCCA CCGCGGTGCA GAACCGGCAA
GACCAGAAAG AGGCGTTCCT GAAAGGCGGT TCTACGGAAA CCCGCAACTC CGGCAATCTG
CAAATGCCGG TCTCGCCGTA TCAGGTCATG GCGGGAACGG TGATCGCCGG GGCGCTGGTG
ACGGGCATCA AGTCGGACTT GCCGGGCGAC GTGATCGTCA CGGTGACGGA GCCGGTCTAC
GACACGGCCA CGGGCAAGTT TCTGCTGATC CCCCAAGGCT CGCGCATCCT GGGCAAATAC
AACAGCCAGG TGAGCTACGG GCAGAGCCGC GTGCAGGTGG TGTGGAACCG CGTCATCCTG
CCGGACACGT CTTCGCTGAA GCTCGACAAC CTCGCGGGCA CCGACCCGGC CGGTTACGCC
GGCCTGGAGG ATGGCGTCGA TTGGCACTGG GATCGCGTCT TCGCGGGTGC GGCGTTGACC
ACGTTGCTGG GCGTGGGTGC CGAGTTGGCC GCGCCGGAGA ACCGGCAGAA CGGCAACCGG
ATCGTGATCG CCGGACGCGA CAGCGCGCAG GACAGCATCA ACCAGGTCGG CCAGGAGATG
ATCCGGCGCA ACATGAACAT CCAGCCGACG CTGACCGAAC GGCCGGGCCT GCCGGTGCGG
ATCATCGTCA ATCGCGATCT GGTGTTGCGG CCGTACCAGC CACTGTTCTT CAATCGGGGT
GCAATGCGAT GA
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| Protein sequence | MSQDDTPDLA APQAGKVAPE AVALRAQPRP VTRLNRRTLA ILVGGLSVAV LGATIWSLQP
HRRGAGEQTE LYNVDRVSKS EGLDGLPADY SKLPPKVPEL GPPLPGDLGP AIVKSQQPVT
PTYAPPGHDP EDARRKEADA AAGSSVFFRS GNQGKAAAPG TAQAAAVAPG SALAGFDPLA
AGPASTAAQP ADPTAVQNRQ DQKEAFLKGG STETRNSGNL QMPVSPYQVM AGTVIAGALV
TGIKSDLPGD VIVTVTEPVY DTATGKFLLI PQGSRILGKY NSQVSYGQSR VQVVWNRVIL
PDTSSLKLDN LAGTDPAGYA GLEDGVDWHW DRVFAGAALT TLLGVGAELA APENRQNGNR
IVIAGRDSAQ DSINQVGQEM IRRNMNIQPT LTERPGLPVR IIVNRDLVLR PYQPLFFNRG
AMR
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