Gene Rpic_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2593 
Symbol 
ID6288311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2703461 
End bp2704090 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID642626165 
ProductOmpA/MotB domain protein 
Protein accessionYP_001900152 
Protein GI187929665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.199586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA AGCTTATTTC CGTCTCGCTG ATCGCCCTGC TGGCCGCCGG CTGCGCCACC 
GAGCAGCAGA ACCAGACCGC CATGGGCACC GGCGTTGGCG CGGCCGTGGG CGCTGGCATT
GGCGCGCTGG TCGGCAACGG CAAGGGCGCC GCCATTGGCG GTGCGCTGGG CGCGGCCACC
GGTGCAGCCG TCGGCTACAA CTGGGGCGCC ATCAAGTCCA AGCTGGCTGG CGATACGGCC
GGCACGGGCA CGCAGATTTC GGAGCAGCCC GACGGCTCGC TCAAGCTGAA CATTCCGAGC
CAGGTCTCGT TCGACACCGA CAGCGCGGTG ATCAAGCCGT CGTTCCGCGG CCCCTTGGAT
AGCGTGGCAC AAACGCTCAC GCAGCATCCG GAGCTGGCCG CCAATGTGGT CGGCCACACG
GATAGCACCG GCAACCCGAA CTACAACTTG ACGCTGTCGC AAAAGCGCGC GCAGAGCGTG
GCGAGCTACC TGACGGACCG CGGCGTGGCC CGCAACCGCC TTTCCGCTGA AGGCCGCGGC
CAGAATCAGC CCGTTGCCGA CAACGCCACC GAGGCCGGCC GCGCCCAAAA TCGCCGCGTC
GAAATTTATT TGAAACCAAT TCAAGGGTAA
 
Protein sequence
MKAKLISVSL IALLAAGCAT EQQNQTAMGT GVGAAVGAGI GALVGNGKGA AIGGALGAAT 
GAAVGYNWGA IKSKLAGDTA GTGTQISEQP DGSLKLNIPS QVSFDTDSAV IKPSFRGPLD
SVAQTLTQHP ELAANVVGHT DSTGNPNYNL TLSQKRAQSV ASYLTDRGVA RNRLSAEGRG
QNQPVADNAT EAGRAQNRRV EIYLKPIQG