Gene Rpic_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2577 
Symbol 
ID6286358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2685851 
End bp2687266 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content65% 
IMG OID642626149 
Productargininosuccinate lyase 
Protein accessionYP_001900136 
Protein GI187929649 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.400333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC AACTCGCCAA GAAGGCCGAA GCGTGGTCCG CCCGCTTTAA CGAGCCGGTG 
TCCGATCTCG TCAAGCGCTA TACCGCATCG GTGTTCTTCG ATAAGCGCCT CGCGCTGTTC
GACATCCAGG GCTCGCTCGC GCACGCCGCC ATGCTGGCCA AGCAGGGCAT CATTGCCGAA
GCCGATCGCG CCGCCATCGA ACAGGGCATG GCGCAGATCC GCCAGGAGAT CGAAGCCGGC
ACGTTCGAGT GGAAGCTGGA CCTGGAAGAC GTGCACCTGA ACATCGAAGC GCGCCTGACC
GCCATGGCGG GCGACGCCGG CAAGCGCCTG CACACGGGCC GCTCGCGCAA CGACCAGGTC
GCCACCGACA TCCGCCTGTG GCTGCGCAGC GAGATCGACA ACATCGTCGG TCTGCTCAAG
GCCCTGCGCG GCGCGCTGCT GGACTTGGCC GAGCAGCACA CCAACACCAT CGTCCCGGGC
TTCACACACC TGCAGGTCGC GCAGCCGGTG GTGTTCGGCC ACCACCTGCT GGCCTACGTC
GAGATGTTCA CGCGCGACAC CGAGCGCATG CTCGACGCCC GCCGCCGCGT CAACCGCCTG
CCGCTGGGTG CCGCTGCACT GGCAGGCACG AGCTACCCGA TCGACCGTGA ATTTGTCGCA
CAGCAACTCG GCTTCGAAGG CGTATGCCGC AACTCGCTGG ATGCCGTGTC CGACCGCGAC
TTCGCCATCG AATTCTGCGC TGCCGCCGCG CTCATCATGA CGCACGTCTC GCGCTTCTCT
GAAGAGCTGG TGCTGTGGAT GAGCCCGCGT GTGGGTTTTA TCGACATTGC CGACCGCTTC
TGCACGGGCA GCTCGATCAT GCCGCAGAAG AAGAACCCCG ATGTGCCCGA ACTGGCACGT
GGCAAAACGG GCCGCGTCAA CGGCCACCTG ATTGGCCTGC TCACGCTGAT GAAGGGCCAG
CCGCTGGCAT ATAACAAAGA CAATCAGGAA GACAAGGAAC CACTGTTCGA TACGGTGGAT
ACGGTGGTCG ACACGCTGCG CATCTTTGCC GACATGGTGC CGGGCATCAC CGTCAAGGCC
GACGCCATGC GCGCCGCTGC GCTGCAGGGC TACGCCACCG CCACCGATCT GGCCGACTAC
CTGGTCAAGC GCGGCCTGCC CTTCCGCGAT GCACATGAAG CCGTGGCCCA CGCCGTGCGT
GCGTGCGACG ACCTGCGCTG CGACCTGGCG GATCTGTCCG TCGCGCAACT GCGTGACATC
TGCGGCCTGG GCGACAAGGC CAACCTGATC GGCGATGATG TGCACACTGT GCTGACGCTG
GAAGGCTCGG TCGCTTCGCG CAACCACATC GGCGGAACGG CGCCGGAGCA GGTGAAGCAA
GCCATTGCGT TTGCACGGGC TGCGCTGGCT GAGTAA
 
Protein sequence
MTSQLAKKAE AWSARFNEPV SDLVKRYTAS VFFDKRLALF DIQGSLAHAA MLAKQGIIAE 
ADRAAIEQGM AQIRQEIEAG TFEWKLDLED VHLNIEARLT AMAGDAGKRL HTGRSRNDQV
ATDIRLWLRS EIDNIVGLLK ALRGALLDLA EQHTNTIVPG FTHLQVAQPV VFGHHLLAYV
EMFTRDTERM LDARRRVNRL PLGAAALAGT SYPIDREFVA QQLGFEGVCR NSLDAVSDRD
FAIEFCAAAA LIMTHVSRFS EELVLWMSPR VGFIDIADRF CTGSSIMPQK KNPDVPELAR
GKTGRVNGHL IGLLTLMKGQ PLAYNKDNQE DKEPLFDTVD TVVDTLRIFA DMVPGITVKA
DAMRAAALQG YATATDLADY LVKRGLPFRD AHEAVAHAVR ACDDLRCDLA DLSVAQLRDI
CGLGDKANLI GDDVHTVLTL EGSVASRNHI GGTAPEQVKQ AIAFARAALA E