Gene Rpic_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2576 
Symbol 
ID6287511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2685028 
End bp2685747 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID642626148 
Productputative transmembrane protein 
Protein accessionYP_001900135 
Protein GI187929648 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.245443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGC GCCGCCACCC CGATCTCGTC GACAAGCTGG CCGCCGAATA TGCGGTCGGC 
ACCTTGCGCG CCGGCGCACG CCGCCGGTTC GAGCAGATCC TTCGCCACGA CGACGCCGTG
CGCGCCACGG TTGAACGCTG GCAACGCTAT CTGGCCGACT TGCCCGCGCT CCAGCCTGCC
ACGGCGCCGC TGCCGGAAAT CCTCTGCCGC GTGGAAGTGC AACTCGGCTG GCGCGAGCCG
ACGCCGGCGC GGAAGGCGCT CTGGCAACGG ATTTGGCAAG GCACCGGCTT CTGGCGCGGC
GCCACCGCAG TCGCGGCGGT TGTCGCGGCG GTCGCGATCG GGCTGAACCT GCGGCTGGCG
CAGCAATTGC GTGATGCACC TGTCGCCAAC GCCGTGGCCG TGCTGCAGGA CGCGCAGGCC
CAGGCGGCCG TCCTCGTCAC CTGGGATGCG CGCACCGGAA CGCTATCGCT CAAGCGGCTG
GATGCAACGC CGCTCAATAC CGAACAGGCC TTGCAGCTCT GGGCGCTGCC CCCCGGCGGG
CATCCGCAGT CACTTGGGGT GATCGGGCAC CAGCGCGCCG TGCGGCTGAC GGTAGCGCAG
CCGTTGCGGC AGGTGCCGGC GCTCGCCATC AGCGTGGAAC CGCGTGGCGG CTCGCCCAAT
CCGCAGGGGC CGACCGGGCC GGTGGTCTTC AAGGGCGCGC TGATCGACAG CACGCTGTAG
 
Protein sequence
MDPRRHPDLV DKLAAEYAVG TLRAGARRRF EQILRHDDAV RATVERWQRY LADLPALQPA 
TAPLPEILCR VEVQLGWREP TPARKALWQR IWQGTGFWRG ATAVAAVVAA VAIGLNLRLA
QQLRDAPVAN AVAVLQDAQA QAAVLVTWDA RTGTLSLKRL DATPLNTEQA LQLWALPPGG
HPQSLGVIGH QRAVRLTVAQ PLRQVPALAI SVEPRGGSPN PQGPTGPVVF KGALIDSTL