Gene Rpic_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2572 
Symbol 
ID6288587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2679971 
End bp2682976 
Gene Length3006 bp 
Protein Length1001 aa 
Translation table11 
GC content67% 
IMG OID642626145 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_001900132 
Protein GI187929645 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.374778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CCGCCGCGCG CCGCGCTTCC TCGCGCGCGA CCACCGCCCG CAAGGCTTCC 
GCCGCCCCCG CCAAGACCAG CAAGGCCACG AAGGCCATCA AGGCTGCCAA GCCCGCCGCC
AAACCGGTGG CCAAGGCCAA TGGCGCGGAC GAAGCCAATG GCGCATCACT CGGCCCCACT
TCCCGGCGCT CGTCGGGCAG CGCCGCGGCC AAGGATCAGC CGCTGAAGGA AGACATCCGC
TTTCTGGGCC GCCTGCTGGG CGACGTGCTG CGTGAACAGG AAGGTGGCGC CGCCTTCGAA
ACCGTCGAGA CGATCCGCCA GACCGCCGTG CGTTTCCGCC GCGACGGCGA CCGCCAGGCC
GAGCAGGAAC TCGACCGCCT GCTGAAAGCC TTGTCGCGTG AGCAAACCAA CTCCGTGGTG
CGCGCGTTCA GCTACTTCTC TCACCTGGCC AACATTGCCG AAGACCAGCA CCACAACCGC
CGCCGCCGCG TGCATGCGCT GGCGGGCTCG CCACCGCAGC CGGGCAGCAT GATGCGCGCG
CTGCTGTCGG TGGCCGACGA GGGTGTCTCG GGTGAGACGC TGCGCCGCTT CTTCGATGCC
GCGTTGATCG TGCCCGTGCT CACGGCCCAC CCGACCGAGG TGCAGCGCAA GAGCATTCTC
GATGCACAGC GTGAAATCGC CCGCCTGCTG GCCGAACGCG ACACGCCGCT GACCACCCGC
GAGCGTGAAC GCAACACGAC GCTGCTGCGC GCGCACGTGA CCAAACTGTG GCAGACACGC
ATGCTGCGCA CCACGCGTCT GATGGTGGCC GACGAGATCG AAAACGCGCT GTCGTACTAC
CAGACGACGT TCCTGCGCGA GATTCCCGCG CTGTACCGCG AACTGGAAGA GGACGTCGCT
GCCGTATTCC CGCGCCGTGG CGCACGTGGC GAACCCACCC CGTTGGCGCC GTTCTTCCAG
ATGGGCTCGT GGATCGGCGG CGACCGCGAC GGCAACCCCT TCGTCACGGC AGAAACCCTG
CGCTACGCCG CCCGCAAGCA GGCCAGTGTG ATCCTTGCGT GGTATCTGGA AGAGATCCAC
GCGCTGGGCG CCGAACTGTC GATGTCGACA TCGCAGGTGG ATGTGAGTGC TGAATTGCTG
GCGCTGGCGG AGCAGTCGCC CGATCGATCG GAGCATCGCT CGGATGAGCC GTACCGCCGC
GCGCTGATCG GCGTGTATGC GCGCCTGGCT GCGACGTGCC GCGAGCTGAC CGGTGAAGAC
GCCGGCCGCC ACGCCGTCGG CCCGGCCCCG GCTTACACGA GCGCGGAAGA GCTGCGCGCC
GACATCCAGA TCGTCACCGA TTCGCTGGCG GCACATCACG GCGAGGCACT GGCTGATGCG
CGTCTGGCCT CGCTGGCGCG TGCGATCGAT GTGTTCGGCT TCCACTTGTC GTCGATCGAC
TTGCGGCAGG TGTCTGACGT GCATGAAGCG ACCGTCGCCG AGCTGCTGAA GGTGGCGGGC
GTGGAAGGCG CGTACGCCGC ACTGTCCGAA GCCGACAAGC GCACGCTGCT GCTGCGCGAG
CTGCAACAGC CGCGTCTGCT GACGCTGCCG TTCCATGCGT ACAGCGAGCA GACTACGCAA
GAGATCGACA TCTTCCGCGC CGCGCGCGAG GTGCGTGCCC GCTACGGCAA CCGCATCGTG
CGCAACTACA TCATCTCGCA CACCGAGACG CTGTCGGACC TGCTCGAAGT GATGCTGCTG
CAGAAGGAAG CCGGCATGTT CCGCGCGAAT GCCAATGGCG CTGGCGTGGG GCTGGACGTG
ATGGTGATCC CGCTGTTCGA GACCATCGAA GACTTGCGCA ACGCCTCGCA GATCATGGGC
GATCTGCTTG CCCTGCCCGG CTTCGATGCC GTACTGGCCG CGCAGGGCAA CGAGCAGGAA
GTCATGCTCG GCTATTCGGA TTCCAACAAG GACGGCGGCT TCCTCACCTC CAACTGGGAG
CTGTACAAGG CCGAGCTGGC GCTGGTGGAG CTGTTCGAGC GCAAGGGCGT GCGCCTGCGC
CTGTTCCATG GCCGCGGCGG CACGGTGGGC CGAGGCGGCG GCCCGACCTA CCAGGCCATC
CTGTCGCAGC CGCCGGGCAC GGTGAACGGG CAGATCCGCT TGACCGAGCA GGGCGAAATC
ATCTCCAGCA AGTTCGCCAA CCCCGAGATC GGCCGGCGCA ACCTGGAAAC CATCGTCGCG
GCCACGCTGG AAGCGACGCT GCTGCCCACG CGCAACCGCC CGAAAGGCCT GGAGGAGTTC
GAAGCCGCGA TGCAGGCGCT GTCGGACAAC GCCTTTGCCG CGTACCGCAA CCTCGTCTAC
GAAACCCCGG GCTTCAAGGA CTACTTCTTC GCCACCACGC CCATCACCGA GATTGCCGAC
CTGAACCTCG GCTCGCGCCC GGCCTCGCGC AAGCTGATGG ACAAGAAGCA CCGCCGCATC
GAAGACCTGC GTGCGATTCC GTGGGGCTTC TCATGGGGCC AGTGCCGTCT GCTGCTGCCG
GGCTGGTTCG GTTTTGGCAG CGCGGTGCAG CGCTGGCTGG ACGACGCCGG CAACGCAAAG
GCCCGCGCCG CGCGCCTGAC CACGCTCAAG CGCATGCACA AGCAGTGGCC GTTCTTTGCG
AACCTGCTGT CGAACATGGA CATGGTCCTG TCCAAGGCCG ATCTGAACGT GGCCTCGCGC
TACGCGCAGC TCTGCGACGA CCGCAAGCTG CGTAACGCGG TGTTCTCGCG CATCTCGGCG
GAGTTCGCGT TGACCGAGCA GATGCTGGCA GCCATCACAG GACAGTCGGA GCGCCTGGCC
GACAACCCGC TGCTGGCACG CTCCATCAAG AACCGCTTCC CGTATCTCGA CCCGCTGAAT
CACTTGCAGG TCGAACTGCT CAAGCGCTTC CGCTCGGGCA AGGCCGGCAG CGACGATGCA
CGCGTGCGGC GCGGCATCCA TCTGTCGATC AACGGGATTG CCGCGGGCCT TCGCAATAGC
GGCTGA
 
Protein sequence
MTQPAARRAS SRATTARKAS AAPAKTSKAT KAIKAAKPAA KPVAKANGAD EANGASLGPT 
SRRSSGSAAA KDQPLKEDIR FLGRLLGDVL REQEGGAAFE TVETIRQTAV RFRRDGDRQA
EQELDRLLKA LSREQTNSVV RAFSYFSHLA NIAEDQHHNR RRRVHALAGS PPQPGSMMRA
LLSVADEGVS GETLRRFFDA ALIVPVLTAH PTEVQRKSIL DAQREIARLL AERDTPLTTR
ERERNTTLLR AHVTKLWQTR MLRTTRLMVA DEIENALSYY QTTFLREIPA LYRELEEDVA
AVFPRRGARG EPTPLAPFFQ MGSWIGGDRD GNPFVTAETL RYAARKQASV ILAWYLEEIH
ALGAELSMST SQVDVSAELL ALAEQSPDRS EHRSDEPYRR ALIGVYARLA ATCRELTGED
AGRHAVGPAP AYTSAEELRA DIQIVTDSLA AHHGEALADA RLASLARAID VFGFHLSSID
LRQVSDVHEA TVAELLKVAG VEGAYAALSE ADKRTLLLRE LQQPRLLTLP FHAYSEQTTQ
EIDIFRAARE VRARYGNRIV RNYIISHTET LSDLLEVMLL QKEAGMFRAN ANGAGVGLDV
MVIPLFETIE DLRNASQIMG DLLALPGFDA VLAAQGNEQE VMLGYSDSNK DGGFLTSNWE
LYKAELALVE LFERKGVRLR LFHGRGGTVG RGGGPTYQAI LSQPPGTVNG QIRLTEQGEI
ISSKFANPEI GRRNLETIVA ATLEATLLPT RNRPKGLEEF EAAMQALSDN AFAAYRNLVY
ETPGFKDYFF ATTPITEIAD LNLGSRPASR KLMDKKHRRI EDLRAIPWGF SWGQCRLLLP
GWFGFGSAVQ RWLDDAGNAK ARAARLTTLK RMHKQWPFFA NLLSNMDMVL SKADLNVASR
YAQLCDDRKL RNAVFSRISA EFALTEQMLA AITGQSERLA DNPLLARSIK NRFPYLDPLN
HLQVELLKRF RSGKAGSDDA RVRRGIHLSI NGIAAGLRNS G