Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2572 |
Symbol | |
ID | 6288587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2679971 |
End bp | 2682976 |
Gene Length | 3006 bp |
Protein Length | 1001 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642626145 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_001900132 |
Protein GI | 187929645 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.374778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCAGC CCGCCGCGCG CCGCGCTTCC TCGCGCGCGA CCACCGCCCG CAAGGCTTCC GCCGCCCCCG CCAAGACCAG CAAGGCCACG AAGGCCATCA AGGCTGCCAA GCCCGCCGCC AAACCGGTGG CCAAGGCCAA TGGCGCGGAC GAAGCCAATG GCGCATCACT CGGCCCCACT TCCCGGCGCT CGTCGGGCAG CGCCGCGGCC AAGGATCAGC CGCTGAAGGA AGACATCCGC TTTCTGGGCC GCCTGCTGGG CGACGTGCTG CGTGAACAGG AAGGTGGCGC CGCCTTCGAA ACCGTCGAGA CGATCCGCCA GACCGCCGTG CGTTTCCGCC GCGACGGCGA CCGCCAGGCC GAGCAGGAAC TCGACCGCCT GCTGAAAGCC TTGTCGCGTG AGCAAACCAA CTCCGTGGTG CGCGCGTTCA GCTACTTCTC TCACCTGGCC AACATTGCCG AAGACCAGCA CCACAACCGC CGCCGCCGCG TGCATGCGCT GGCGGGCTCG CCACCGCAGC CGGGCAGCAT GATGCGCGCG CTGCTGTCGG TGGCCGACGA GGGTGTCTCG GGTGAGACGC TGCGCCGCTT CTTCGATGCC GCGTTGATCG TGCCCGTGCT CACGGCCCAC CCGACCGAGG TGCAGCGCAA GAGCATTCTC GATGCACAGC GTGAAATCGC CCGCCTGCTG GCCGAACGCG ACACGCCGCT GACCACCCGC GAGCGTGAAC GCAACACGAC GCTGCTGCGC GCGCACGTGA CCAAACTGTG GCAGACACGC ATGCTGCGCA CCACGCGTCT GATGGTGGCC GACGAGATCG AAAACGCGCT GTCGTACTAC CAGACGACGT TCCTGCGCGA GATTCCCGCG CTGTACCGCG AACTGGAAGA GGACGTCGCT GCCGTATTCC CGCGCCGTGG CGCACGTGGC GAACCCACCC CGTTGGCGCC GTTCTTCCAG ATGGGCTCGT GGATCGGCGG CGACCGCGAC GGCAACCCCT TCGTCACGGC AGAAACCCTG CGCTACGCCG CCCGCAAGCA GGCCAGTGTG ATCCTTGCGT GGTATCTGGA AGAGATCCAC GCGCTGGGCG CCGAACTGTC GATGTCGACA TCGCAGGTGG ATGTGAGTGC TGAATTGCTG GCGCTGGCGG AGCAGTCGCC CGATCGATCG GAGCATCGCT CGGATGAGCC GTACCGCCGC GCGCTGATCG GCGTGTATGC GCGCCTGGCT GCGACGTGCC GCGAGCTGAC CGGTGAAGAC GCCGGCCGCC ACGCCGTCGG CCCGGCCCCG GCTTACACGA GCGCGGAAGA GCTGCGCGCC GACATCCAGA TCGTCACCGA TTCGCTGGCG GCACATCACG GCGAGGCACT GGCTGATGCG CGTCTGGCCT CGCTGGCGCG TGCGATCGAT GTGTTCGGCT TCCACTTGTC GTCGATCGAC TTGCGGCAGG TGTCTGACGT GCATGAAGCG ACCGTCGCCG AGCTGCTGAA GGTGGCGGGC GTGGAAGGCG CGTACGCCGC ACTGTCCGAA GCCGACAAGC GCACGCTGCT GCTGCGCGAG CTGCAACAGC CGCGTCTGCT GACGCTGCCG TTCCATGCGT ACAGCGAGCA GACTACGCAA GAGATCGACA TCTTCCGCGC CGCGCGCGAG GTGCGTGCCC GCTACGGCAA CCGCATCGTG CGCAACTACA TCATCTCGCA CACCGAGACG CTGTCGGACC TGCTCGAAGT GATGCTGCTG CAGAAGGAAG CCGGCATGTT CCGCGCGAAT GCCAATGGCG CTGGCGTGGG GCTGGACGTG ATGGTGATCC CGCTGTTCGA GACCATCGAA GACTTGCGCA ACGCCTCGCA GATCATGGGC GATCTGCTTG CCCTGCCCGG CTTCGATGCC GTACTGGCCG CGCAGGGCAA CGAGCAGGAA GTCATGCTCG GCTATTCGGA TTCCAACAAG GACGGCGGCT TCCTCACCTC CAACTGGGAG CTGTACAAGG CCGAGCTGGC GCTGGTGGAG CTGTTCGAGC GCAAGGGCGT GCGCCTGCGC CTGTTCCATG GCCGCGGCGG CACGGTGGGC CGAGGCGGCG GCCCGACCTA CCAGGCCATC CTGTCGCAGC CGCCGGGCAC GGTGAACGGG CAGATCCGCT TGACCGAGCA GGGCGAAATC ATCTCCAGCA AGTTCGCCAA CCCCGAGATC GGCCGGCGCA ACCTGGAAAC CATCGTCGCG GCCACGCTGG AAGCGACGCT GCTGCCCACG CGCAACCGCC CGAAAGGCCT GGAGGAGTTC GAAGCCGCGA TGCAGGCGCT GTCGGACAAC GCCTTTGCCG CGTACCGCAA CCTCGTCTAC GAAACCCCGG GCTTCAAGGA CTACTTCTTC GCCACCACGC CCATCACCGA GATTGCCGAC CTGAACCTCG GCTCGCGCCC GGCCTCGCGC AAGCTGATGG ACAAGAAGCA CCGCCGCATC GAAGACCTGC GTGCGATTCC GTGGGGCTTC TCATGGGGCC AGTGCCGTCT GCTGCTGCCG GGCTGGTTCG GTTTTGGCAG CGCGGTGCAG CGCTGGCTGG ACGACGCCGG CAACGCAAAG GCCCGCGCCG CGCGCCTGAC CACGCTCAAG CGCATGCACA AGCAGTGGCC GTTCTTTGCG AACCTGCTGT CGAACATGGA CATGGTCCTG TCCAAGGCCG ATCTGAACGT GGCCTCGCGC TACGCGCAGC TCTGCGACGA CCGCAAGCTG CGTAACGCGG TGTTCTCGCG CATCTCGGCG GAGTTCGCGT TGACCGAGCA GATGCTGGCA GCCATCACAG GACAGTCGGA GCGCCTGGCC GACAACCCGC TGCTGGCACG CTCCATCAAG AACCGCTTCC CGTATCTCGA CCCGCTGAAT CACTTGCAGG TCGAACTGCT CAAGCGCTTC CGCTCGGGCA AGGCCGGCAG CGACGATGCA CGCGTGCGGC GCGGCATCCA TCTGTCGATC AACGGGATTG CCGCGGGCCT TCGCAATAGC GGCTGA
|
Protein sequence | MTQPAARRAS SRATTARKAS AAPAKTSKAT KAIKAAKPAA KPVAKANGAD EANGASLGPT SRRSSGSAAA KDQPLKEDIR FLGRLLGDVL REQEGGAAFE TVETIRQTAV RFRRDGDRQA EQELDRLLKA LSREQTNSVV RAFSYFSHLA NIAEDQHHNR RRRVHALAGS PPQPGSMMRA LLSVADEGVS GETLRRFFDA ALIVPVLTAH PTEVQRKSIL DAQREIARLL AERDTPLTTR ERERNTTLLR AHVTKLWQTR MLRTTRLMVA DEIENALSYY QTTFLREIPA LYRELEEDVA AVFPRRGARG EPTPLAPFFQ MGSWIGGDRD GNPFVTAETL RYAARKQASV ILAWYLEEIH ALGAELSMST SQVDVSAELL ALAEQSPDRS EHRSDEPYRR ALIGVYARLA ATCRELTGED AGRHAVGPAP AYTSAEELRA DIQIVTDSLA AHHGEALADA RLASLARAID VFGFHLSSID LRQVSDVHEA TVAELLKVAG VEGAYAALSE ADKRTLLLRE LQQPRLLTLP FHAYSEQTTQ EIDIFRAARE VRARYGNRIV RNYIISHTET LSDLLEVMLL QKEAGMFRAN ANGAGVGLDV MVIPLFETIE DLRNASQIMG DLLALPGFDA VLAAQGNEQE VMLGYSDSNK DGGFLTSNWE LYKAELALVE LFERKGVRLR LFHGRGGTVG RGGGPTYQAI LSQPPGTVNG QIRLTEQGEI ISSKFANPEI GRRNLETIVA ATLEATLLPT RNRPKGLEEF EAAMQALSDN AFAAYRNLVY ETPGFKDYFF ATTPITEIAD LNLGSRPASR KLMDKKHRRI EDLRAIPWGF SWGQCRLLLP GWFGFGSAVQ RWLDDAGNAK ARAARLTTLK RMHKQWPFFA NLLSNMDMVL SKADLNVASR YAQLCDDRKL RNAVFSRISA EFALTEQMLA AITGQSERLA DNPLLARSIK NRFPYLDPLN HLQVELLKRF RSGKAGSDDA RVRRGIHLSI NGIAAGLRNS G
|
| |