| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2570 |
|---|
| Symbol | |
|---|
| ID | 6288585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2676721 |
|---|
| End bp | 2678829 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626143 |
|---|
| Product | bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001900130 |
|---|
| Protein GI | 187929643 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase
[COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.866591 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACC ACTTGCCACC GCGCTTGTCA CCATCGTCGC CCGCTTCCAG CACGCCGCCT
GTTCAATCGG CAACCCCGCC CGTGGTGGTG GTCACGCGTC CGCGCGCACA GGCGCCCATG
CTGGTGGCGG CGCTTGAGCG CCACGGCCTG CGCACGCACC AGTTTCCGCT GCTCGACATT
GCGCCGACGC CCAATCTCGA CGACTTGCGT GCCGCGCTGG GCGATCCGTC GCGCTATGCG
CTGGTCGTGT TCGTCAGCCC CAACGCCGTG CAGCAGGCAT TTTCCGCCAT GCCGGAAGGC
TTCCGCTGGC CGCAGGAAGT ACCGGTGGCA GTAGTGGGGC CCGCGAGCGC ACAGGCGCTT
GCCACGCACG GGGTCGCGCC GCCCGCGCAC CGTGTGATCA AGCCCGACAC GCATGCCGAC
GACGCCCGCC AGGATTCCGA GGCGCTCTAC GCGCGGCTGG ATGTGCCCTC GCTGAGCGGC
CGTGAAGTGC TGATCGTGCG CGGCAACGGT GGCCGTGAGT GGCTGGCCGA TCAGCTGCGC
GAAGCCGGTG CATCGGTCCG TACGGCGGAA GCCTATCGCC GCAGCGTACC GGTGCCCGAT
GCCGCTGCGT GGCTTGCGTT GCGTGCCGTG CTTTCGTCCC GCCACGCCTG GACGCTCACC
AGCTCCGAGG CCGTCCGCAA TCTTGATGAG CTGGCCCGCG CCAATCTGTC GCCCGCTGAT
CTCGATACGC TGCACGGCGC GCCATGCTTT GCTTCGCACG CCCGCATCGT CGAACAGGCC
GAATCGCTGG GTTTCCGCGA TGTGACGCTG ACCGGCGCCG GCGACGACCG GCTCCTCGCC
AGCGTGCTCG CCTGGGCCGG GCCGATATGG GCTCCCGAGC ATGCCCCAGC AACGGTGCCG
GATGATTCAA ACCCGTCTAC TTCTTCTTCC ACTGTGACGC AGACTCCCGT TCCCTCGTCC
GCTCCCGCTT CAACGCCAGC GCCCGCAGCC GTCAAGCCGA GTCCTGCGCC TGCTGCTCCG
CCGGCTGCGT TTGCGCCCAC CATGACGGTC AACCATGCGC CGCGCCGTGG CGGTTGGCTC
ATCTGGGTGG CGCTGGTCGC GGTCGTGGCG GCAGTGGCCG CGCTACAGGT GCGCAACGAA
CGCCTTGCAC GCGAGATCCG TCAGCGCGCC CAAACGAATG AGGCGCTGGC GCAGGAGATG
CGCGTGCTCT CGCGGGCCGA TCAGGATTCG GTTTCCCAGC TGCAGCAGAA GTTTGGCGCG
CTGGATGCCC GCACCGCTGA AACGCGCGAT CGCCAGGCAG CGCTGGAGCA GGCCAATCAA
GACCTCCTGC GCAACCGCGA TGACTGGCAG CGCGCCGAGA TCCAGCGTTC GCTGGAAGTG
ACCGCTGAAC AACTGCAACT GACCGGCAAC GTCGCGGGTG CATTGGCTGC GCTGCAAACG
ATCGACGCGC GCCTGGCCAC GCTCGACAAG CCGCAGTTCA ACGCCGTGCG TCGGGCGGTA
TCGCGCGACA TGGCCAAGCT CAAGGCGATG CCGTCGTTTG ATCTGGCCGG TGCTGCGCTG
CGGTTGGATG ACGCCATCAA CGCGGTCGAT ACGCTGCCGC TCGTCTCGTC GGCCCAGCCG
CTGGAGGCGG AACAGGCTGC GCAGGCGCCG CATACTGTGG CGAAACCCTC GAAGAATGCC
AAGGCACACG CTGCGTCGGC GCCCGTTGCC TCGACGCCGC CAAACGCCGG ATGGTCGGCA
GGCGTGCGCG CTTGGTGGGG CCGCCTGTGG AACGACGTGC GCGGCGAACT CGGCCAGATC
GTACAGGTGC GCCGCGTCGA TCAGACCGAG GCACTGCTGC TGTCTTCCGA CCAAGCGTGG
TTCCTGCGCG AAAACCTCAA GCTGCGCCTG ATGAATGCGC GCCTGGCGTT GCTCTCGCGC
AATGAAGCCG TGTTCCGCGC CGATCTGGGG CGCGCTGATA CGCTGCTCGC GCGCTACTTT
GATACGCAGT CTTCGCGCGT GACCACAGTG CAGAATCAAC TGTCGCAGGC GCGCGCGACG
GTTGGCACGC TGCAGGTTCC AACGCTAGCT GACAGCCTTG CCGCCGTGCG CGGTTCGGGC
AAGGAGTGA
|
|---|
| Protein sequence | MDDHLPPRLS PSSPASSTPP VQSATPPVVV VTRPRAQAPM LVAALERHGL RTHQFPLLDI
APTPNLDDLR AALGDPSRYA LVVFVSPNAV QQAFSAMPEG FRWPQEVPVA VVGPASAQAL
ATHGVAPPAH RVIKPDTHAD DARQDSEALY ARLDVPSLSG REVLIVRGNG GREWLADQLR
EAGASVRTAE AYRRSVPVPD AAAWLALRAV LSSRHAWTLT SSEAVRNLDE LARANLSPAD
LDTLHGAPCF ASHARIVEQA ESLGFRDVTL TGAGDDRLLA SVLAWAGPIW APEHAPATVP
DDSNPSTSSS TVTQTPVPSS APASTPAPAA VKPSPAPAAP PAAFAPTMTV NHAPRRGGWL
IWVALVAVVA AVAALQVRNE RLAREIRQRA QTNEALAQEM RVLSRADQDS VSQLQQKFGA
LDARTAETRD RQAALEQANQ DLLRNRDDWQ RAEIQRSLEV TAEQLQLTGN VAGALAALQT
IDARLATLDK PQFNAVRRAV SRDMAKLKAM PSFDLAGAAL RLDDAINAVD TLPLVSSAQP
LEAEQAAQAP HTVAKPSKNA KAHAASAPVA STPPNAGWSA GVRAWWGRLW NDVRGELGQI
VQVRRVDQTE ALLLSSDQAW FLRENLKLRL MNARLALLSR NEAVFRADLG RADTLLARYF
DTQSSRVTTV QNQLSQARAT VGTLQVPTLA DSLAAVRGSG KE
|
|---|
| |