| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2494 |
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| Symbol | |
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| ID | 6289643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2606822 |
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| End bp | 2608576 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642626070 |
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| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
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| Protein accession | YP_001900058 |
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| Protein GI | 187929571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.295659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.19306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACAC TACGAGTGAT TGCACTTGCG GCTGCCATGG CGGCTGCAAG TGTTGCCGTG
CACGCGGCAA CGCCCCCCGT TACCGATGCC ATGATCGAGA ACGATGCGAA ATCGTCGAAC
GACGTGCTGA CCTGGGGCAT GGGTACGCAA GGGCAGCGCT TCTCGACGCT CACCAAGATC
AACACGAAGA ATGTCAGCCA GCTTGTACCG GCATGGTCGT TCTCGTTTGG CGGTGAGAAG
CAGCGCGGTC AGGAATCCCA GCCGCTGATC TACAACGGCA AGATGTTCGT CACGGCGTCG
TACTCGCGCA TCTATGCGAT CGACCTGAAG ACCGGCAAGA AGCTGTGGAA GTACGAGCAG
CGTCTGCCGG AGGGCATCAT GCCCTGCTGC GACGTCGTCA ACCGCGGCGC CGCGCTGTAC
GACAACCTGG TCATCTTCTC CACGCTGGAT GCGCAGCTGA TCGCGCTCAA TCAGGACACC
GGCAAGATCG TCTGGAAAGA CAAGATCGAG GACTACGCCG CCGGCTATTC AACGACCGCC
GCACCGCTGA TCGTGAAGGG CATGGTGCTG ACGGGCGTGT CGGGTGGCGA GTTTGGCGTG
GTCGGCCGTG TGGAAGCGCG CGATGCCAAG ACCGGCCAGT TGATCTGGTC GCGTCCGACG
GTCGAAGGCC ACATGGGCTA CAAGTACGAC AAGGATGGCA ACAAGACCGA GAACGGCATG
ACGGGCACGC TCAACGCGAG CTGGCCCGGC GAGACGTGGA AGACCGGTGG CGCATCGACG
TGGCTGGGCG GCACCTACGA CCCGCAGACC AACCTGGTCT ACTTCGGCAC CGGCAACCCG
GGACCGTGGA ACAGCCATCT GCGCAAGGGC GACAACCTGT ATTCGTCTTC CACGCTGGCC
ATCGACCCGG ACACCGGCAA GATCGTCTGG CACTACCAGA ACACCCCGAA CGACGGCTGG
GATTTCGACG GCGTGAACGA GTTCGTGACG TTCGACATGG ACGGCAAGCG CGTCGGCGGC
AAGGCTGACC GCAACGGCTT CTTCTACGTG AACGATGCGA AAACCGGCAA GCTGCTCAAC
GCGTTCCCGT TCGTGAAGGT CAACTGGGCC ACCAGCATCG ACCTCAAGAC CGGCCGCCCG
AACTACGCAC CCGACCACCG TCCGGGCGAT CCGGCCCAGG CCGCGGGTGA AGAGAAGAAG
GGCAAGTCGG TGTTTGCCGA GCCCGGCTTC CTGGGCGGCA AGAACCAGAT GCCGATGGCA
TACAGCCCGC AAACCGGGCT GTTCTACGTG CCCGCCAACG AGTGGGGCAT GGACATCTGG
AACGAACCCG TGAGCTACAA GAAGGGCGCC GCCTACCTGG GAGCTGGCTT TACCATCAAG
CCGCTCAATG AGGATTACAT CGGCGCACTG CGCGCGATCA ATCCGAAGAC GGGCAAGATG
GAATGGCAGA TCAAGAACAA CGCGCCGCTG TGGGGCGGTG TGATGACGAC TGCCGGTGGC
CTGGTGTTCT GGGGCACGCC CGAGGGCTAT CTGAAGGCGG CCGATGCCAA GACCGGCAAG
GAGCTGTGGC AATTCCAGAC TGGCAGCGGC ATCGTCGCGC CGCCCGTCAC CTGGGAAGAC
AACGGCGAGC AGTTCGTGGC CGTGGTGTCG GGCTGGGGTG GTGCAGTGCC GCTGTGGGGC
GGTGAAGTGG CCAAGCGCGT GAACTTCCTG GAGCAGGGCG GTTCGGTTTG GGTGTTCAAG
CTGCACAAGA ACTGA
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| Protein sequence | MRTLRVIALA AAMAAASVAV HAATPPVTDA MIENDAKSSN DVLTWGMGTQ GQRFSTLTKI
NTKNVSQLVP AWSFSFGGEK QRGQESQPLI YNGKMFVTAS YSRIYAIDLK TGKKLWKYEQ
RLPEGIMPCC DVVNRGAALY DNLVIFSTLD AQLIALNQDT GKIVWKDKIE DYAAGYSTTA
APLIVKGMVL TGVSGGEFGV VGRVEARDAK TGQLIWSRPT VEGHMGYKYD KDGNKTENGM
TGTLNASWPG ETWKTGGAST WLGGTYDPQT NLVYFGTGNP GPWNSHLRKG DNLYSSSTLA
IDPDTGKIVW HYQNTPNDGW DFDGVNEFVT FDMDGKRVGG KADRNGFFYV NDAKTGKLLN
AFPFVKVNWA TSIDLKTGRP NYAPDHRPGD PAQAAGEEKK GKSVFAEPGF LGGKNQMPMA
YSPQTGLFYV PANEWGMDIW NEPVSYKKGA AYLGAGFTIK PLNEDYIGAL RAINPKTGKM
EWQIKNNAPL WGGVMTTAGG LVFWGTPEGY LKAADAKTGK ELWQFQTGSG IVAPPVTWED
NGEQFVAVVS GWGGAVPLWG GEVAKRVNFL EQGGSVWVFK LHKN
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