Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2441 |
Symbol | valS |
ID | 6287660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2549971 |
End bp | 2552847 |
Gene Length | 2877 bp |
Protein Length | 958 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626019 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001900007 |
Protein GI | 187929520 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.602088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC AGAACCAGTC CCTCGCCAAG AGTTTCGAAC CCGCCACCAT CGAGCAGAAG TGGAGCGCGG CCTGGGAAGC AATGGGCGTC TCCCGCGCGA CGCTCGAGGC CGGCAAGCCC GACTTTTGTA TCCAGCTCCC GCCGCCGAAC GTGACGGGCA CGCTGCACAT GGGCCACGCG TTCAACCAGA CCATCATGGA CGGCCTGACG CGCCACGCGC GCATGGCCGG TGCCAACACA CTTTGGGTGC CGGGCACCGA CCACGCCGGC ATCGCCACCC AGATCGTCGT CGAGCGCCAA CTGGATGCCC AGGGTGTATC GCGCCACGAC ATGGGCCGCG AGAAGTTCGT CGAGAAAGTG TGGGAATGGA AGGAGCAATC GGGCTCGACC ATCACGCGCC AGGTGCGCCG GATGGGCGCC TCGATCGACT GGGAGCGAGA ATACTTCACG ATGGACCCGA AGATGTCGCG CGCGGTCAGC GACGTGTTCG TGCGTCTCTA CGAGCAAGGC CTGATCTACC GCGGCAAGCG CCTGGTCAAC TGGGACCCGG TGCTGGGCAC CGCAGTGTCC GACCTGGAAG TGGTGAGCGA GGAAGAGGAA GGCTCGCTGT GGCACATCCG CTATCCGCTG GCCGAACCGG ATACCGTGCA TGGCCTGACG CACCTGACGG TCGCCACCAC CCGTCCGGAA ACGATGCTCG GCGACACGGC CGTGATGGTG CATCCTGAGG ACGAACGTTA CGCCCACCTC ATCGGCAAGT TCGTCCACCT GCCGCTGACT GATCGCAAGA TCCCGGTGAT TGCCGACGAA TACGTCGACC GCGCGTTCGG TACCGGCGTG GTCAAGGTGA CCCCGGGCCA CGACTTCAAC GACTACGCGG TCGGCCAGCG CCACAAGCTG CCGCAGTTGT CGATCCTGAC GCTCGACGCG AAGATCGTTG CCGATGCTCC CGCCGCCTAT GCCGGCCTGG ATCGCTTCGA CGCGCGTAAA AAGATCGTCG AGGACCTCGA AGCGCAAGGC CTGCTGGCCG AAGTCAAGAA ACACACGCTG ATGGTGCCGC GCGGTGACCG GACCGGTGTC GTGATCGAGC CGATGCTGAC CGACCAGTGG TTCGTCGCCA TGAGCAAGCC GGCACCGGAA GGCACGCGCT TCCCGGGCCG CTCCATCGCT GAAGTGGCGC TGGACGCCGT GCAGAGCGGC AAGATCAAGC TCGTTCCCGA GCAGTGGGTC AACACGTACA ACCAGTGGCT GAACAACATC CAGGACTGGT GTATCTCGCG CCAACTGTGG TGGGGCCACC AGATTCCGGC GTGGTACGAC GAAGCCGGCA ACGTGTACGT GGGGCGCACG GAAGAAGAAG CCCGCGCCCA GGCCGCAGCC AAGGGTTACA CCGGCGCCCT CAAGCGTGAC GACGACGTGC TCGACACGTG GTTCTCGTCC GCGCTGGTGC CGTTCTCGTC GCTGGGCTGG CCGGCCGACA CGCCAGAGCT GAAGCACTTC CTGCCTTCCA CCGTGCTGGT GACGGGCTAC GACATCATCT TCTTCTGGGT GGCGCGCATG GTCATGATGA CCCTGCATTT CACCGGCGAA GTGCCCTTCC ACACCGTCTA TGTGCATGGC CTCGTGCGCG ATTCGGAAGG CAAGAAGATG AGCAAGTCCG AGGGCAACAC GCTCGACCCG GTGGACCTGA TCGACGGTAT CGCGCTGGAG CCGCTGCTGG CCAAGCGCAC CACCGGCCTG CGCCGCCCAA AGGATGCGCC CAAGGTCGAA AAGCGCACGC GCAAGGAATT TCCCGACGGC ATTCCCGCAT TCGGCGCCGA CGCGTTGCGC TTCACCTTCG CGTCGCTCGC CACGCTGGGC CGCAGCATCA ACTTTGACCC GGGCCGCTGC GAGGGTTACC GCAACTTCTG CAACAAGCTG TGGAACGCCA CGCGCTTCGT ACTGATGAAC ACCGAAGGCC AGGACTGCGG CATGCAGGAA TGCGTCGGTG ATTGCGGCCC CGAAGGCTAC CTGGACTTCT CGCAGGCCGA CCGTTGGATC GTCTCGCTGC TGCAGCGCGT GGAAACCGAA GTGGAGAAAG GCTTTGCCGA CTACCGCTTC GACAACATCG CCAACGCCAT CTACAAATTC GTCTGGGACG AATACTGCGA CTGGTACCTG GAACTGGCGA AAGTGCAGAT CCAGACCGGC ACGCCGGCCC AGCAACGCGC GACGCGCCGT ACCCTGCTGC GCGTGCTGGA AACCGTGCTG CGCCTGGCGC ATCCGATCAT TCCGTTCATT ACCGAAGAAC TCTGGCAGAA GGTTGCGCCG ATGGCCGGCC GCGCCAAGGG CGATGGCACC GAAAGCCTCG CGCTGCAGGA ATACCCGCGC GCCGTCCTGA CCAAGATCGA CGAGCAGGCC GAGCAGTGGG TGCAGCAGCT AAAGGCACTG GTAGACGCCT GCCGCAACCT TCGCGGCGAG ATGAACATCT CCCCTGCGCA ACGTGTGCCG CTGTACGCCA ATGGCGAAGC CGAGTTCCTG CAGGTGGCGG CGCCGTACGT GCAAGCGCTG GGCAAGCTGT CCGAAGTGAA GGTCTACACG GACGCTGCCG CCATGGAGCA GGACGGCGCC GGTGCGCCGG TCGCCATCGT CGGCGAGAAC AAGCTGCTGC TGAAGATCGA GATCGACGTG GCTGCCGAGC ATGCGCGCCT GTCGAAGGAA ATCGACCGCT TGCGCGGCGA GATCACCAAG TGCGAAGCCA AGCTCGGTAA CGAATCGTTC GTCGCCCGCG CGCCGGCCGC CGTGGTGGAA CAGGAACAAA AGCGTGTGGC CGATTTCAAA GCCACGCTGG CCAAGCTGGA AGCCCAGATC GCACGGCTGC CGGTACAGGC AGCCTGA
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Protein sequence | MTDQNQSLAK SFEPATIEQK WSAAWEAMGV SRATLEAGKP DFCIQLPPPN VTGTLHMGHA FNQTIMDGLT RHARMAGANT LWVPGTDHAG IATQIVVERQ LDAQGVSRHD MGREKFVEKV WEWKEQSGST ITRQVRRMGA SIDWEREYFT MDPKMSRAVS DVFVRLYEQG LIYRGKRLVN WDPVLGTAVS DLEVVSEEEE GSLWHIRYPL AEPDTVHGLT HLTVATTRPE TMLGDTAVMV HPEDERYAHL IGKFVHLPLT DRKIPVIADE YVDRAFGTGV VKVTPGHDFN DYAVGQRHKL PQLSILTLDA KIVADAPAAY AGLDRFDARK KIVEDLEAQG LLAEVKKHTL MVPRGDRTGV VIEPMLTDQW FVAMSKPAPE GTRFPGRSIA EVALDAVQSG KIKLVPEQWV NTYNQWLNNI QDWCISRQLW WGHQIPAWYD EAGNVYVGRT EEEARAQAAA KGYTGALKRD DDVLDTWFSS ALVPFSSLGW PADTPELKHF LPSTVLVTGY DIIFFWVARM VMMTLHFTGE VPFHTVYVHG LVRDSEGKKM SKSEGNTLDP VDLIDGIALE PLLAKRTTGL RRPKDAPKVE KRTRKEFPDG IPAFGADALR FTFASLATLG RSINFDPGRC EGYRNFCNKL WNATRFVLMN TEGQDCGMQE CVGDCGPEGY LDFSQADRWI VSLLQRVETE VEKGFADYRF DNIANAIYKF VWDEYCDWYL ELAKVQIQTG TPAQQRATRR TLLRVLETVL RLAHPIIPFI TEELWQKVAP MAGRAKGDGT ESLALQEYPR AVLTKIDEQA EQWVQQLKAL VDACRNLRGE MNISPAQRVP LYANGEAEFL QVAAPYVQAL GKLSEVKVYT DAAAMEQDGA GAPVAIVGEN KLLLKIEIDV AAEHARLSKE IDRLRGEITK CEAKLGNESF VARAPAAVVE QEQKRVADFK ATLAKLEAQI ARLPVQAA
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