| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2435 |
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| Symbol | |
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| ID | 6287713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2541264 |
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| End bp | 2544077 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642626013 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001900001 |
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| Protein GI | 187929514 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.326826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA GTCAAGAAAC GCTGTTGCTC GTCGATGGCT CGAGTTATTT GTACCGTGCC
TATCACGCAC TGCCCGACTT GCGAAACGGG GAAGGGTTTC CTACGGGGGC CATCTACGGC
ATCGTGAACA TGCTGCGCAA ACTGCGCAAC GACTACCCGG CCAAGTATAG CGCTTGCATT
TTCGACGCCA AAGGCAAGAC CTTTCGCGAT GACCTCTATC CGGCCTACAA GGAGCATCGC
GCGCCCATGC CCGATGACCT GCGCGCGCAG ATCGAACCGA TCCACGAAGC CGTGCGGGCA
TTGGGTTGGC CCATCCTGGT GGTCGAAGGT GTCGAGGCCG ACGATGTGAT CGGCACCCTG
GCTGAACGGG CTGCTCGCGA AGGCGTTCGC ACCATCGTCT CAACGGGTGA TAAGGACCTC
GCCCAACTGG TGAATGACCA CGTGACGCTG GTCAACACCA TGACCAACGA AACGCTCGAT
CCGGCCGGCG TGCAAGCCAA GTTTGGCGTG CCGCCCGAGC GCATCGTCGA CTATCTTTCG
CTGATTGGCG ACACCGTGGA CAACGTGCCC GGCGTGCCGA AGGTGGGCCC GAAAACCGCG
GTGAAATGGT TGACGGAGTT CGGCTCGCTC GACAACGTCA TCGCGCATGC AGGCGAGATC
AAGGGCGTGG TGGGCGAGAA CCTGCGCAAC ACGCTCGAAT GGCTTCCCAA GGGCCGCGAA
CTGCTGACCG TGAAGCTCGA CTGCAACCTC AGCAAAGAGG TGCCGACATT CGATGCGCTG
ATCGACGGCG GCGAAGATAA ATCCAAGCTC GTCGATTTCT TCTCGCGTTA CGGTTTCAAG
ACGTGGCTGC GCGAGGCTTC CGGTGAAGCG CTGCCCGATA CGCGCAGCGT CGGGGCCGCG
CGCAACGCCG CGACGCCCGT GAAGAATTAC GCCGGCGAGG CCGCACAACT GCAAGCACAG
GCCAACCTGT TCGACGTGGA AGCGCCGCCC GATGAGATCA AGTACGAGAC AGTGACGACC
GAGGCGCAGC TTGAATCGTG GATGCAGCGC CTGGACGAAG TGGATCTCGT CTGCATCGAC
ACCGAGACGA CGTCCATCGA CCCGATGCTC GCGCAGTTGG TGGGGATTTC GCTGTCGGTC
AAGCCGGGCG AGGCCTGCTA CATCCCGGTG GCACATCGTG GCCCGGATGT CGCCGGGTTT
GATGCGGCAG CGCAGCTCTC GCGCGACACG GTGCTCGCGC GCATGAAGCT GTGGCTCGAA
GACGAATCAC GCAAGAAGGT CGGCCAGCAT CTGAAGTACG ACGCGCACGT GTTTGCCAAC
CACGACATCG CGCTGCGCGG CATCGAGCAC GACACGATGC TTGAATCGTA CGTGCTCGAG
TCCCACCGCA ATCACGGCAT GGATGCACTG GCCGAGCGGG TGCTGCATTT GAAGACGATC
ACTTACGAGG CCGTGTGCGG CAAGGGCGCA TCGCAGATCG GCTTTGACGA GGTGCCGCTC
GATCGCGCGA CCGAGTACGC AGCGGAAGAC GCCGATGTCA CGCTGCGCCT GCATCGCACG
CTGTTCCCCA AGGTGGCCGA AGACGACAAG CTGCGCTACG TCTACGAGCA GATCGAAATG
CCCGCCTCCA TCGTGCTGCA GAAGATGGAG CGCAACGGCG TGCTGATCGA TGCCGACCGC
CTGGCCAAGC AGAGCAACGA GCTGGGCCTG CGCCTGATCG ATCTGGAAGC CGAGGCACAC
AAGCTTGCGG GTCAGCCGTT CAACCTCAGC TCACCCAAGC AGATCGGCGA CATCTTCTTC
AATCAGATGA AGCTTCCGGT CATCAAGAAG ACCGCGAGCG GTGCGCCGTC GACAGACGAG
GAGGTACTGC AGAAGCTGGC CGAAGACTAC CCGCTGCCGA AGCTGCTGCT CGATTACCGG
GGCCTGGCCA AGCTCAAATC GACCTACACC GACAAGCTGC CGAAGATGGT CAACCCGCGC
ACTGGCCGGG TCCACACCAC CTACGGTCAG GCGACGGCGG TGACGGGGCG CCTGGCCTCG
ACCGATCCGA ACCTGCAGAA CATTCCAGTG CGCACGGAAG AAGGGCGGCG CATTCGCGAG
GCATTCATCG CGCCGGAGGG CAGCGTCATC GTGTCGGCCG ACTACTCGCA GATCGAACTG
CGCATCATGG CCCATCTGTC GCAGGACGAA GGCCTGATGC GCGCATTCCG TGAGGGCCAG
GACGTTCACC GCGCGACCGC TGCTGAAGTG TTCAACGTGA CGCCGCTGGA GGTGACGCCC
GATCAGCGCC GTGTGGCCAA GGTCATCAAC TTCGGCCTGA TCTACGGGAT GAGCGCGTTC
GGGCTGGCGA GCAACCTGGG CATTGGGCGC GATGCAGCCA AGCTCTATAT CGACCGCTAC
TTCGCTCGCT ACCCCGGCGC CGCGAGCTAC ATGGACGAAA CCCGGCAGCG GGCGCGCGAG
CAAGGCTACG TGGAGACCGT CTTTGGCCGT CGCCTGTGGC TGCCCGACAT CAATGGCGGC
AACGGCCCGC GCCGTCAGGC TGCCGAGCGC GCCGCCATTA ACGCGCCGAT GCAAGGCACG
GCGGCTGACC TGATCAAGCT GTCGATGCTG GCAGTGCAAG GCTGGCTCGA CGCGGAAGCG
ATGCGCTCGC GCCTGGTCAT GCAGGTGCAC GATGAATTGG TGCTGGAAGT CCCGCAGGAC
GAACTGGCCG TGGTGCGCGA GCGTCTGCCA GAGTTGATGT GCAGCGTCGC AACGCTGCGC
GTGCCGCTGG TGGCCGAGGT CGGCGTGGGC GCGAACTGGG AAGAAGCGCA CTGA
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| Protein sequence | MSESQETLLL VDGSSYLYRA YHALPDLRNG EGFPTGAIYG IVNMLRKLRN DYPAKYSACI
FDAKGKTFRD DLYPAYKEHR APMPDDLRAQ IEPIHEAVRA LGWPILVVEG VEADDVIGTL
AERAAREGVR TIVSTGDKDL AQLVNDHVTL VNTMTNETLD PAGVQAKFGV PPERIVDYLS
LIGDTVDNVP GVPKVGPKTA VKWLTEFGSL DNVIAHAGEI KGVVGENLRN TLEWLPKGRE
LLTVKLDCNL SKEVPTFDAL IDGGEDKSKL VDFFSRYGFK TWLREASGEA LPDTRSVGAA
RNAATPVKNY AGEAAQLQAQ ANLFDVEAPP DEIKYETVTT EAQLESWMQR LDEVDLVCID
TETTSIDPML AQLVGISLSV KPGEACYIPV AHRGPDVAGF DAAAQLSRDT VLARMKLWLE
DESRKKVGQH LKYDAHVFAN HDIALRGIEH DTMLESYVLE SHRNHGMDAL AERVLHLKTI
TYEAVCGKGA SQIGFDEVPL DRATEYAAED ADVTLRLHRT LFPKVAEDDK LRYVYEQIEM
PASIVLQKME RNGVLIDADR LAKQSNELGL RLIDLEAEAH KLAGQPFNLS SPKQIGDIFF
NQMKLPVIKK TASGAPSTDE EVLQKLAEDY PLPKLLLDYR GLAKLKSTYT DKLPKMVNPR
TGRVHTTYGQ ATAVTGRLAS TDPNLQNIPV RTEEGRRIRE AFIAPEGSVI VSADYSQIEL
RIMAHLSQDE GLMRAFREGQ DVHRATAAEV FNVTPLEVTP DQRRVAKVIN FGLIYGMSAF
GLASNLGIGR DAAKLYIDRY FARYPGAASY MDETRQRARE QGYVETVFGR RLWLPDINGG
NGPRRQAAER AAINAPMQGT AADLIKLSML AVQGWLDAEA MRSRLVMQVH DELVLEVPQD
ELAVVRERLP ELMCSVATLR VPLVAEVGVG ANWEEAH
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