Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2417 |
Symbol | |
ID | 6287513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2517557 |
End bp | 2518381 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625994 |
Product | OmpW family protein |
Protein accession | YP_001899983 |
Protein GI | 187929496 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.729819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC TGACTGTCGC ATTGATGGCG GCCTGCGCAT CCGCAGGCGC CATGGCGCAG CAGGCCGGTG ACAACGTGGC GACGGTGGGC TGGTTCCACA TCATGCCGCA GGACTCGAGC AACAACCTGA CCACCAGCGT GATCAATGCG CCGATCAATG ATCCGCTGCG CTTGCCCGGC AGCTTCACGT CGCCCAACAG CGGGCTGCGC GTAAGCAACG CCAACACGCT GGGCCTGACG CTCACGCACT TCTTTACCGA CAACATTGCG CTGACCACGA TTGCCGGCGT GCCGCCCGAA TTCAAGCTGA CCGGGCATGG CGTGATCCGC GCACCCGGGC CCGCAGGGGC GCTCGGCCAC GTCGATCTGG ACGACCCGTC CAACCAGCCG GCCGTGCGCA AGGCGCGCCA ATGGAGCCCC GGGGTCATTC TGCAGTGGTA CTTCGGGCAC GCGCAGTCGA CGTTCCGTCC GTTCGTGGGC GTGGGTGTGG TCTACAGCTT CTTCACCAAC ATCGAGCTGA ATCCGTACTT TGCGGCTGCG GTGAATCGCG AACTGGGCAG CGTGCTGGCA GCGGGGGCGG GCAAGCCGGG GCCGACGTAT GTCGAGGGGA AATCGTCGTC GTCGTGGGCG CCGATCTTCA ACCTCGGTGC GAGCTACGCG ATCAACAAGC AATGGGCCTT GACGGCAACG GTGTCGTACT TGCCGCTCAA GACCGAAGCG GCGACCGTCA TCAAGGCGTC GGACGGCACC ACGCTGGCCA CCACCAAGAC CACGCTCAAG GCCAATCCGA TCATCACGTT CGTTGGGGTG TCGTACAAGT TTTAG
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Protein sequence | MKQLTVALMA ACASAGAMAQ QAGDNVATVG WFHIMPQDSS NNLTTSVINA PINDPLRLPG SFTSPNSGLR VSNANTLGLT LTHFFTDNIA LTTIAGVPPE FKLTGHGVIR APGPAGALGH VDLDDPSNQP AVRKARQWSP GVILQWYFGH AQSTFRPFVG VGVVYSFFTN IELNPYFAAA VNRELGSVLA AGAGKPGPTY VEGKSSSSWA PIFNLGASYA INKQWALTAT VSYLPLKTEA ATVIKASDGT TLATTKTTLK ANPIITFVGV SYKF
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