Gene Rpic_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2417 
Symbol 
ID6287513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2517557 
End bp2518381 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID642625994 
ProductOmpW family protein 
Protein accessionYP_001899983 
Protein GI187929496 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.729819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC TGACTGTCGC ATTGATGGCG GCCTGCGCAT CCGCAGGCGC CATGGCGCAG 
CAGGCCGGTG ACAACGTGGC GACGGTGGGC TGGTTCCACA TCATGCCGCA GGACTCGAGC
AACAACCTGA CCACCAGCGT GATCAATGCG CCGATCAATG ATCCGCTGCG CTTGCCCGGC
AGCTTCACGT CGCCCAACAG CGGGCTGCGC GTAAGCAACG CCAACACGCT GGGCCTGACG
CTCACGCACT TCTTTACCGA CAACATTGCG CTGACCACGA TTGCCGGCGT GCCGCCCGAA
TTCAAGCTGA CCGGGCATGG CGTGATCCGC GCACCCGGGC CCGCAGGGGC GCTCGGCCAC
GTCGATCTGG ACGACCCGTC CAACCAGCCG GCCGTGCGCA AGGCGCGCCA ATGGAGCCCC
GGGGTCATTC TGCAGTGGTA CTTCGGGCAC GCGCAGTCGA CGTTCCGTCC GTTCGTGGGC
GTGGGTGTGG TCTACAGCTT CTTCACCAAC ATCGAGCTGA ATCCGTACTT TGCGGCTGCG
GTGAATCGCG AACTGGGCAG CGTGCTGGCA GCGGGGGCGG GCAAGCCGGG GCCGACGTAT
GTCGAGGGGA AATCGTCGTC GTCGTGGGCG CCGATCTTCA ACCTCGGTGC GAGCTACGCG
ATCAACAAGC AATGGGCCTT GACGGCAACG GTGTCGTACT TGCCGCTCAA GACCGAAGCG
GCGACCGTCA TCAAGGCGTC GGACGGCACC ACGCTGGCCA CCACCAAGAC CACGCTCAAG
GCCAATCCGA TCATCACGTT CGTTGGGGTG TCGTACAAGT TTTAG
 
Protein sequence
MKQLTVALMA ACASAGAMAQ QAGDNVATVG WFHIMPQDSS NNLTTSVINA PINDPLRLPG 
SFTSPNSGLR VSNANTLGLT LTHFFTDNIA LTTIAGVPPE FKLTGHGVIR APGPAGALGH
VDLDDPSNQP AVRKARQWSP GVILQWYFGH AQSTFRPFVG VGVVYSFFTN IELNPYFAAA
VNRELGSVLA AGAGKPGPTY VEGKSSSSWA PIFNLGASYA INKQWALTAT VSYLPLKTEA
ATVIKASDGT TLATTKTTLK ANPIITFVGV SYKF