Gene Rpic_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2372 
Symbol 
ID6286328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2466023 
End bp2466766 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID642625949 
ProductLamB/YcsF family protein 
Protein accessionYP_001899938 
Protein GI187929451 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.839401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA TTGATCTGAA TGCCGACCTC GGCGAAGGCT GCGATACCGA CGAGGCGCTC 
CTCGCACTGG TGAGTTCCGC CAACATCGCC TGCGGCTGGC ACGCCGGCGA CGTCAACACG
ATGCGCCAGA CCGTGGGCTG GGCGCTGCGC CAGGGCGTGT CGATTGGCGC GCATCCGAGC
TTTCCCGATC GCGAAAACTT TGGCCGCACT GAGATGCATC TGCAGCCCGA TGAAATCTAC
GCGGGCGTGC TGTTCCAGAT TGGTGGGCTG TCAGCCATCG TGCGTGCGCA GGGCGGCAAG
CTGGCGCACG TGAAGGCGCA CGGCGCGCTG TACAACCAGG CTTCGCGCGA CCGGCCGCTG
GCCATGGCCA TCGTGCACGC GATCCGCGAT TTCGATCCGT CGCTGGTGGT GTTTGGCCTG
GCGGGAGGTG AACTGGTCAA GGCCGCGCGT GAACTTGGCC TGCAGGCCAA GGAAGAGGTG
TTTGCCGATC GCGGTTACAA CGCAGACGGC TCGCTCGTCA AACGCGGTAC GCCGGGCGCC
CTGATCGACA GCGAAGATGC CGCGCTGGAC CAGACGCTGA CGATGGTGCG CGAGCAGCGC
GTGAAGGCCA TCGACGGCAC GTGGGTTCCG ATCCGCGCGG AAACGGTTTG TCTGCACGGC
GACGGCGCGC ATGCGCTGGC GTTCGCGCGA CGCATTCGGG AACGGCTTGG CAGCGAAGGC
ATCGCTGTTC GCGCCGGCGC CTGA
 
Protein sequence
MTAIDLNADL GEGCDTDEAL LALVSSANIA CGWHAGDVNT MRQTVGWALR QGVSIGAHPS 
FPDRENFGRT EMHLQPDEIY AGVLFQIGGL SAIVRAQGGK LAHVKAHGAL YNQASRDRPL
AMAIVHAIRD FDPSLVVFGL AGGELVKAAR ELGLQAKEEV FADRGYNADG SLVKRGTPGA
LIDSEDAALD QTLTMVREQR VKAIDGTWVP IRAETVCLHG DGAHALAFAR RIRERLGSEG
IAVRAGA