Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2274 |
Symbol | |
ID | 6289068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2393424 |
End bp | 2395844 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625848 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001899840 |
Protein GI | 187929353 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.607807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCAT CCGCTTCCGG CTCCGGCCCC GCGTCGCCTC GTACGGGTGC GCCGAACTTG CCTGATCCGC GTGGCGCCGA CCTGGTAGGG GAGCGGGCAG CCCTGCCGCC CAAATCGCAT AAGGGCGCAA GCGCCGACGC CGCTGGCTCG ACAGCCAAGC CGGAGGGCGC CGACACGCTC TTCATTGATG CGGTGCTCGA GCAGACCTAT CGGCATCTTT TCGGCCCGAC CTCGCAGCCG GCGGCACCGC CTCGCCAACA GGTCGTCTCC ATTTCGGGGC TGACCGAAAA GCTGTCGTAT CTGAAGCCGG CGGATCTCAA GCTGGTGAAG GAAGCCTTCC ACTTTTCCGA TGAGGCGCAC CTCGGGCAGT ACCGCCAAAG CGGCGAGCCG TACATCACGC ATCCCGTGGC CGTGGCAGAG ATCTGCGCGG GCTGGAAGCT GGATGTGCAA TCGATCATGG CGGCGCTGCT GCACGACGTG ATCGAAGACC AGGGCGTGAC CAAGAGCGAG CTTGCCGAGA AGTTCGGCCC CAAAGTCGCA GAGCTGGTCG ACGGCCTGAC CAAGTTGGAC AAGCTTGAAT TCCAGAGCCG CGAACAGGCG CAAGCCGAGA GCTTCCGCAA GATGCTGCTC GCGATGGCGC GCGATGTGCG CGTGATTCTC GTCAAGCTCG CCGATCGTAC GCACAACATG CGCACGCTCG ACCACGTGCC GCCGGAGAAG CGCCGCCGCA TTGCCGGCGA GACGATGGAG ATTTACGCGC CGATCGCGCA CCGCCTCGGC CTGAATACGA CATACCGGGA GCTGCAGGAA CTGAGCTTCC GTATCGGCTC GCCGTTCCGG TATGCCACGC TCGAGAAGGC GGTGAAGGCG GCGCGCGGCA ATCGGCGCGA GGTCGTGAGC CGCATTCTGG AAACGGCCCA GCGCGCGCTG ACCGACGCGG GCATCCCGGC CGAAATGACC GGGCGCGAAA AAACCCTGTA CAGCATTTAC CGCAAGATGC ACGACAAGCA GTTGTCGTTC TCGCAGGTGC TGGATGTGTA TGGTTTTCGC GTGGTGGTCG ACACGCAGAT GCAGTGCTAC ATGACGATGG GTGCGCTGCA CAGCCTGTAC AAGCCGATGC CCGGCAAGTT CAAAGACTAC ATTGCCATCC CCAAGATCAA CGGTTATCAG TCGCTGCACA CGACGCTGGT GGGCCCGTTC GGCACACCGG TCGAGTTCCA GATCCGGACG CGTGAGATGA ACCAGATTGC GGAAGCCGGC GTGGCCGCAC ACTGGATGTA CAAGCAGCAC CACGACGAGC CCGATCGCGC GCAGCAGCAA GCGCATCAGT GGCTGCAGTC GCTGCTCGAC ATCCAAAGCC AGACGGGGGA TTCGCAGGAG TTTCTGGAGC ACGTCAAGAT CGACCTGTTC CCGGATGCGG TCTACGTGTT CACGCCCAAG GGCGAGATCC GCGCGCTGCC GCGCGGTGCT ACGGCGCTGG ACTTCGCCTA CGCTGTGCAC AGCGATCTGG GCAACCAGTG TGTGGCGGTC AAGATCAACA ACGAACTGCT GCCGTTGCGT ACGGAGCTGA AAAACGGCGA CATCGTCGAG GTGGTGACGG CGCCGTATTC AAAGCCGAAC CCCGCATGGC TCACGTTCGT GCGCACAGGC AAGGCGCGCG CGGCGATCCG GCATTTCCTC AAGACGGCCA AGCTGGATGA GGCGATTCAA CTGGGCGAGC GTTTGCTCGA ACAGGCGCTG CGTCAGATCG GCATCGACAT GAAGGCCGTG TCCGCCCAGG TATGGGAGCG CGTCGTGCAG TGGACGGGCA ACAAGGCGCG TGAAGACGTT TTTGCGGATC TCGCGCTCGG CCGCCGGGTG GCCGCCGTGG TTGCGCGCCG TCTCGAAATT CTTCTGCAAG AAGGCGGTCA CGACGGCGAT GAAGCCTTGA TGGCGGCCGT GCATACCTTC GCTGGCGACG AGGCCCCTGC CGTCACCGTG AGTGGCGACG AAGGCATGGC AATGGTGTTC TCTTCGTGCT GCCGCCCGAT TCCCGGTGAC CCGATCGTCG GCTATATCGG CAAGGGCGAA GGCTTGCAGA TCCACGTGCA GGAATGCCGC GTGGCCAAAC GTCTGCATGG CAAGGATCCC GAGCATTGGA TTGACGTCAT GTGGGCGGAG CACACGACAC GCGCGTTCGA TGTGTCGATC AAGGTGCTGG TGCGCAATAC GAAGGGCATT CTGGCGCGTG TCGCCGCCGA CCTGACGTCG GCTGACGCCA ACGTGGCGCA CGTGTCGATG GAGCAAGAGG GCGATCAGGA AGCGACGTAC ATGACGTTCC TGATCCAGGT GCATGATCGC GTGCACTTGG CCGATGTGAT GCGCGCGCTG CGGCGCAACC CGGATGTGAT TCGTATTGCG CGAGATCGCG GTGGAGATTG A
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Protein sequence | MPSSASGSGP ASPRTGAPNL PDPRGADLVG ERAALPPKSH KGASADAAGS TAKPEGADTL FIDAVLEQTY RHLFGPTSQP AAPPRQQVVS ISGLTEKLSY LKPADLKLVK EAFHFSDEAH LGQYRQSGEP YITHPVAVAE ICAGWKLDVQ SIMAALLHDV IEDQGVTKSE LAEKFGPKVA ELVDGLTKLD KLEFQSREQA QAESFRKMLL AMARDVRVIL VKLADRTHNM RTLDHVPPEK RRRIAGETME IYAPIAHRLG LNTTYRELQE LSFRIGSPFR YATLEKAVKA ARGNRREVVS RILETAQRAL TDAGIPAEMT GREKTLYSIY RKMHDKQLSF SQVLDVYGFR VVVDTQMQCY MTMGALHSLY KPMPGKFKDY IAIPKINGYQ SLHTTLVGPF GTPVEFQIRT REMNQIAEAG VAAHWMYKQH HDEPDRAQQQ AHQWLQSLLD IQSQTGDSQE FLEHVKIDLF PDAVYVFTPK GEIRALPRGA TALDFAYAVH SDLGNQCVAV KINNELLPLR TELKNGDIVE VVTAPYSKPN PAWLTFVRTG KARAAIRHFL KTAKLDEAIQ LGERLLEQAL RQIGIDMKAV SAQVWERVVQ WTGNKAREDV FADLALGRRV AAVVARRLEI LLQEGGHDGD EALMAAVHTF AGDEAPAVTV SGDEGMAMVF SSCCRPIPGD PIVGYIGKGE GLQIHVQECR VAKRLHGKDP EHWIDVMWAE HTTRAFDVSI KVLVRNTKGI LARVAADLTS ADANVAHVSM EQEGDQEATY MTFLIQVHDR VHLADVMRAL RRNPDVIRIA RDRGGD
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