| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2262 |
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| Symbol | |
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| ID | 6289254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2379236 |
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| End bp | 2380306 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625834 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001899828 |
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| Protein GI | 187929341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.865753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCGA AATTCAAGCG TGGCATGGCC GCGCTGGCAG TGGCATCGGC ACTGGGGGCA
GCAAGTGCCG GTGCGCAGGC GCAGTCGTCC GTCACGCTGT ACGGCCAGGT GGATGCCTGG
GCGGGCGCCA CCAAGACCCT GGGCGCATCG GATCGCGCCT GGGGCGTCAA CTCGGGCGGT
ATGTCGACCT CGTACTGGGG CATGAAGGGC AGCGAAGATC TGGGCAATGG CTTGAAGGCG
ATCTTCACGC TGGAAGCGTT CTTCCGCCCG GACACCGGCA AGTACGGGCG CTTTGACGGC
GATACGTTCT TCGCCCGCAA CTCGTTCGTC GGCCTGCAAT CGAGCACGTG GGGTTCGATC
AAGCTCGGCC GCCTGACGCC GCCGTATTTC GTATCGACGA TCCTGTTCAA CCCGTTCATC
GATTCGTACA CGTTCTCGCC GATGGTGTTC CACACGTACC TCGGCAACGG CCTGCGCGGC
CCCGGCGGTA TCTCGGGTCT GGTGGGCGAT TCGGGCTGGA ACAACGCGAT CATGTATTCG
ACGCCGGACT TCAACGGTCT GACCGCCAAC TTCATCTACG GCGCGGGCGA GCAAGCCGGC
CACAACGGCC AGAACAAGTG GGGCGGCAAC TTCCTGTACT TCCATGGCAA CTTCGCAGCC
ACGGCGGCTT TCCAGCAGGT GCGCTTCGAC TCCGCCCCGG GTGACCTGAA CGCACTGGTG
GCAGGCTTCT CGCGTCAGAC GGCCGCGCAG CTCGGTGCCA CGTACGACTT TGGCGTGGCC
AAGGTCTACG GCCAGTACCA GTACATCAAG AACGCCATCA ACTCGGGGGA CGCGAAGAGC
AACGGCGGCC AACTGGGCAT GTCGGTGCCG GTGGGCCCGG GCAGCATCCT GGCGTCGTAC
GCGTACACCA AAACTTCGGG TGCGGCTGAC GTGAAGCGCA ACACGTGGGC GGTCGGTTAC
GACTATTCGC TGTCCAAGCG CACTGACGTG TACGCCGCGT ACATGCGCGA CAAGGTGACG
AGCCTCAGCT CGGCAGACAC CTTCGGCGTG GGCATCCGCG CGAAGTTCTA A
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| Protein sequence | MQSKFKRGMA ALAVASALGA ASAGAQAQSS VTLYGQVDAW AGATKTLGAS DRAWGVNSGG
MSTSYWGMKG SEDLGNGLKA IFTLEAFFRP DTGKYGRFDG DTFFARNSFV GLQSSTWGSI
KLGRLTPPYF VSTILFNPFI DSYTFSPMVF HTYLGNGLRG PGGISGLVGD SGWNNAIMYS
TPDFNGLTAN FIYGAGEQAG HNGQNKWGGN FLYFHGNFAA TAAFQQVRFD SAPGDLNALV
AGFSRQTAAQ LGATYDFGVA KVYGQYQYIK NAINSGDAKS NGGQLGMSVP VGPGSILASY
AYTKTSGAAD VKRNTWAVGY DYSLSKRTDV YAAYMRDKVT SLSSADTFGV GIRAKF
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