Gene Rpic_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2227 
SymbolilvH 
ID6286216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2338039 
End bp2338530 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID642625799 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_001899793 
Protein GI187929306 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.469114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACA TCATTTCCGT CCTGCTGGAA AACGAACCGG GCGCGCTGTC GCGCGTGGTG 
GGCCTGTTCT CGGCGCGCGG CTACAACATC GAGACGCTGA CGGTCGCCCC GACTGAAGAC
GCCTCGCTGT CGCGCATGAC GATCGTCACG ACCGGTTCGG ACGACATCAT CGAGCAGATC
ACCAAGCACC TGAACCGCCT GGTGGAAGTC GTCAAGGTCG TCGACCTGAC CGAAGGTGCG
CACATCGAGC GCGAGCTGAT GCTTGTGAAG GTGCGCGCGG TCGGCAAGGA GCGTGAGGAG
ATGAAGCGTA CCGCGGACAT CTTCCGCGGC CGCATCATCG ACGTGACCGA GAAGACCTAC
ACGATCGAGC TGACCGGCAA CGGCAGCAAG CTCGACGCGT TTCTCGATGC CATCGATCGC
ACTGCAATTC TTGAGACCGT TCGTACGGGC GGCTCGGGCA TCGGCCGCGG CGAGCGCATT
CTGAAGGTTT GA
 
Protein sequence
MRHIISVLLE NEPGALSRVV GLFSARGYNI ETLTVAPTED ASLSRMTIVT TGSDDIIEQI 
TKHLNRLVEV VKVVDLTEGA HIERELMLVK VRAVGKEREE MKRTADIFRG RIIDVTEKTY
TIELTGNGSK LDAFLDAIDR TAILETVRTG GSGIGRGERI LKV