Gene Rpic_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2217 
Symbol 
ID6289138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2326251 
End bp2327255 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID642625789 
ProductNAD(P)H quinone oxidoreductase, PIG3 family 
Protein accessionYP_001899783 
Protein GI187929296 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.573138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA TTGAAATCAC CCAGTACGGT GGCCCTGAAG TCTTGAAGCT TGGCGAGCGC 
CCGATGCCGG AGGCCAAGGC CGGCGAGGTT CTGATCCGCG TGCGTGCAGC GGGCGTGAAC
CGGCCCGATG TGTTCCAGCG CACGGGCAAC TATCCGGTGC CGCCCGGTGC CTCGGATATT
CCGGGGCTCG AAGTTGCAGG CGAGATAGTC AGCGGTGATC TGGCGCACGC CGACAATCGC
TACGGCCTGA AGGTAGGCGA TCGCGTCTGC GCGCTGGTGC AAGGCGGCGG TTATGCGGAG
TTCTGCACGG CGCCGTTGGG CCAGGTGCTG CCTGTGCCGG CCGGCTTGTC CGATGTCGAA
GCCGCTGCAT TGCCAGAAAA CTATTTCACC GTGTGGTCGA ACGTGTTCGA CCGAGGCCTG
CTGGGGCGGG GCGCGCACGG CGCCGATGAA ACGCTGCTCG TGCAGGGCGG CTCCAGCGGC
ATCGGCACGA CGGCGATTCA GATCGCGTCT GCATTGGGTC ACCGCGTGTT CGCCACGGCC
GGTAGCGCCG AAAAGTGTGA CGCCTGCGTC GAGCTCGGGG CCACGCGCGC CATCAACTAC
AAGACCGAGG ATTTCGTTGA AATCGTCAAG GCCGAGACAG GGCGCGGCGC CGATGTGGTG
CTCGACATGG TCGGCGGCAG TTATGTCGCG CGCGAAATCG CCTGCACCGC CGACGATGGC
CGCATCGTCC TGATCGCGTT GCTGGGCGGC GCCAAGGCCG AGGTGCCGCT GGGCGACATC
CTGCGTCGGC GCATTACCTT GACGGGCTCG ACGCTGCGCC CGCGTCCGGT TGCATTCAAG
GCGGCCATCG CGGCCAATCT GTATGAAACG GTCTGGCCGT TGCTTGCGTC TGTGCGCATC
AAGCCGGTCG TCCATGAGGT CATGCCGGCC GCACAGGCCG CGCAGGCGCA TGCTTTGATG
GAATCGAGCG CGCATATCGG CAAGATCATG TTGGTTTGGG ATTGA
 
Protein sequence
MKAIEITQYG GPEVLKLGER PMPEAKAGEV LIRVRAAGVN RPDVFQRTGN YPVPPGASDI 
PGLEVAGEIV SGDLAHADNR YGLKVGDRVC ALVQGGGYAE FCTAPLGQVL PVPAGLSDVE
AAALPENYFT VWSNVFDRGL LGRGAHGADE TLLVQGGSSG IGTTAIQIAS ALGHRVFATA
GSAEKCDACV ELGATRAINY KTEDFVEIVK AETGRGADVV LDMVGGSYVA REIACTADDG
RIVLIALLGG AKAEVPLGDI LRRRITLTGS TLRPRPVAFK AAIAANLYET VWPLLASVRI
KPVVHEVMPA AQAAQAHALM ESSAHIGKIM LVWD