| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2212 |
|---|
| Symbol | |
|---|
| ID | 6287760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2323120 |
|---|
| End bp | 2323722 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625783 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_001899778 |
|---|
| Protein GI | 187929291 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.470174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AGCTTGCCAC CCTGAAGGCC GCGCTGGAAA AGGCGCTGGG CAATCGCGTT
CAAAGCCTGA CCGAGTCGGT CGGTGAACTC ACCCTCGTGG TGAAGGCTGC CGATTACCTC
GACGCCATGC GCACGCTGCG CGACGACGCT TCGCTCAAAT TTGAACAGCT GATGGACTTG
TGCGGCGTCG ACTACGCCGA CTACGGCGAC GGTGCCTGGA ACGGCCCGCG TTTCGCTGCG
GTGTCGCATC TGCTGTCGAT CACGCACAAC TGGCGCGTTC GCGTGCGCGT GTTTGCGCCG
GACGATGACC TGCCCGTGGT GTCGTCGGTG ACCACGATCT GGAATTCCGC TGACTGGTTC
GAGCGCGAAG CGTTCGACCT TTACGGTCTT GTGTTCGAAG GCCATCCGGA CCTGCGCCGC
ATCCTGACCG ACTACGGCTT CATTGGCCAC CCGTTCCGCA AGGACTTCCC CGTGTCGGGT
TACGTTGAAA TGCGTTACGA CCCGGTGCAG CGCCGCGTGG TCTACCAGCC GGTCACCATC
GAGCCGCGCG AGATTACGCC GCGTGTGATC CGTGAGGATC AATACGGTGG TCTGAAGCAC
TGA
|
|---|
| Protein sequence | MTDKLATLKA ALEKALGNRV QSLTESVGEL TLVVKAADYL DAMRTLRDDA SLKFEQLMDL
CGVDYADYGD GAWNGPRFAA VSHLLSITHN WRVRVRVFAP DDDLPVVSSV TTIWNSADWF
EREAFDLYGL VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPVQ RRVVYQPVTI
EPREITPRVI REDQYGGLKH
|
|---|
| |