| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2199 |
|---|
| Symbol | |
|---|
| ID | 6288883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2308836 |
|---|
| End bp | 2309447 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642625770 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001899765 |
|---|
| Protein GI | 187929278 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.603136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.404575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC ACACCCCTCT GAACGAAGCC CCTGATGCGA CGCAGGACCC CGACGCCGGT
CTGCGCGAGA CGCAAGTTGC ATCCGCGCTG ATGCACCAGG GTAAATTTCT CACGCTCAAG
CACGACATCG TCCGCCTGCC GGACGGCCGC AACGCCAGCC GCGAATATCT CATCCACCCA
GGCGCGGTAA TGATGATCCC GTTGTTCGAC GACGGTACGG TGCTGATGGA GCGTCAGTTC
CGCTACCCGG TTGGCAAGGT GATGATTGAA TTCCCCGCCG GCAAGCTGGA TCCGCAGGAA
GGCGCGCTCA CATGCGGCAA GCGCGAACTG CGCGAGGAAA CCGGCTACAC GGCCGAGCGC
TGGGAGTACC TCACGCGCAT TCACCCCGTC ATTTCGTATT CCACCGAGTT CATCGACATC
TATCTCGCGC GCGATCTCAA GCAGGGCGCG GCAATGCTGG ATGAAGGCGA ATTTCTCGAG
ACCTTCGTCA CGCCGGCCGG CCAACTGATC GATTGGGTGC GCGAAGGCAA GATTTCCGAC
GTGAAGACCA TCATCGGCAC GTTCTGGCTC GAGAAGATTC TGTCCGGAGC ATGGACGCCA
GGTGCCGTCT GA
|
|---|
| Protein sequence | MSDHTPLNEA PDATQDPDAG LRETQVASAL MHQGKFLTLK HDIVRLPDGR NASREYLIHP
GAVMMIPLFD DGTVLMERQF RYPVGKVMIE FPAGKLDPQE GALTCGKREL REETGYTAER
WEYLTRIHPV ISYSTEFIDI YLARDLKQGA AMLDEGEFLE TFVTPAGQLI DWVREGKISD
VKTIIGTFWL EKILSGAWTP GAV
|
|---|
| |