Gene Rpic_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2163 
Symbol 
ID6289761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2276633 
End bp2277778 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content65% 
IMG OID642625734 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_001899729 
Protein GI187929242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.304741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.191747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA ATCAACCGCA CATCTCCAGC GCGTTCGACA GCGGCGCCAT CGAAATCGTC 
GATGCCGCAC GCGCCGATGC CATCCGCCTG CGCATTCGCC GCGATTCGCA CGCTGACTTC
ACGCAGTGGT TCCACTTTCG CCTGCAAGGC GTGCAGGGCC AGGCCTGCAA GTTGGCCCTG
GAAAACGCCG GCGAATGCAC CTACGCCTCC GGCTGGAAGG ACTACCGCGC CGTCGCCTCG
TATGACCGCG AGCACTGGTT TCGTGTGCCG ACCCGCTATG ACGGCAAGAC GTTGACGGTC
GAGGTGACGC CCGAGCACGA CAGCATCTGG TTTGCCTATT TCGAGCCGTA TTCGGACGAG
CGACACCTTT CGCTCGTGGC CGCTGCGCAA ACGCAGCCGG GCGTGCGCAC GCAGCGCCTG
GGGCAAACGG TGCAGGGCCG CGACATGACC AGCATCACCG TCGGTGAACC CGGCCCCGGC
AAGAAAAACG TGTGGATCAT CGCGCGCCAG CATCCGGGCG AGACGATGGC CGAATGGTTC
GTTGAAGGGC TGCTCGCACG CCTGACGCGT CAGGGTGTCT GGCGCGGCGA TCCCATCGGC
CGTGTGCTCG CCGAGCGCGC CGTCTTCCAT ATCGTGCCGA ACATGAACCC GGATGGCTCG
TCCCTGGGCA ACCTGCGCAC CAATGCCGCA GGCGCCAACC TGAACCGCGA GTGGATGGAA
CCCGACGCGC AGCGCAGTCC CGAGGTGTTG GCTGTGCGGC AGGCCATCGA GCAAACCGGC
GTCGACCTGT TTTTCGACAT CCACGGCGAC GAGGCGCTGC CTTATGTGTT TGTGGCCGGC
AGTGAAATGC TGCCCGGCTT TACCGATGCA CAGCGTGCCG ATCAGGACCG CTTTGTCGCG
GCCTTCCTGC GGGCATCACC GGATTTCCAG ACGCGATACG GCTACGAGGC CAGCAGGTAC
AACGAAGACG CGCTCAAGCT CGCCTCCAAG TACATCGGCC ACACCTATGG CTGCCTGTCG
TTGACGCTGG AAATGCCGTT CAAGGACAAC GCCGACCTGC CCGACGCACG CGTGGGCTGG
GACGGCGCCC GCAGCGCCGC TTTGGGTGCG GCCATGCTGC AGGCGATCCT GGAGTATCTC
GGCTGA
 
Protein sequence
MTANQPHISS AFDSGAIEIV DAARADAIRL RIRRDSHADF TQWFHFRLQG VQGQACKLAL 
ENAGECTYAS GWKDYRAVAS YDREHWFRVP TRYDGKTLTV EVTPEHDSIW FAYFEPYSDE
RHLSLVAAAQ TQPGVRTQRL GQTVQGRDMT SITVGEPGPG KKNVWIIARQ HPGETMAEWF
VEGLLARLTR QGVWRGDPIG RVLAERAVFH IVPNMNPDGS SLGNLRTNAA GANLNREWME
PDAQRSPEVL AVRQAIEQTG VDLFFDIHGD EALPYVFVAG SEMLPGFTDA QRADQDRFVA
AFLRASPDFQ TRYGYEASRY NEDALKLASK YIGHTYGCLS LTLEMPFKDN ADLPDARVGW
DGARSAALGA AMLQAILEYL G