Gene Rpic_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2148 
SymbolsdhB 
ID6287860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2260273 
End bp2260974 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content61% 
IMG OID642625719 
Productsuccinate dehydrogenase iron-sulfur subunit 
Protein accessionYP_001899714 
Protein GI187929227 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTA TTTTTGAAGT CTATCGCTAC GATCCGGACA AGGACGCAGC GCCCCGCATG 
CAGACCTACG AGGTTGAACT TGACGGTCAC GAGCGCATGC TGCTCGACGC GCTGGTCAAG
CTGAAGAAGC TCGACGAGTC GATCGCGTTC CGTCGTTCGT GCCGCGAAGG CGTGTGCGGC
TCCGACGCCA TGAACATCAA CGGCAAGAAT GGTCTGGCGT GCCTGACCAA CATGCGTGAG
CTGCCCGAGA AGATCGTGCT GCGCCCGCTG CCGGGGCTGC CGGTGGTGCG CGACCTGATC
GTCGACATGA CGCAGTTCTT CAACCAGTAC CACTCGATCA AGCCGTACCT GATCAACGAC
GAGCCGCCGC CCGAGAAGGA GCGTCTGCAG TCGCCGGAAG AGCGCGAAGA GCTTGACGGC
CTGTACGAGT GCATTCTGTG CGCGAGCTGC TCGACGTCGT GCCCGTCGTT CTGGTGGAAC
CCGGACAAGT TCGTCGGCCC GGCCGGTCTG CTGCAGGCAT ATCGTTTCAT CGCCGACAGC
CGCGACCAGG CCACCAGCGA ACGTCTGGAC AATCTGGAAG ATCCGTACCG CCTGTTCCGC
TGCCACACCA TCATGAATTG CGTCGATGTG TGCCCGAAGG GGCTGAACCC GACCAAGGCC
ATCGGCAAGA TCAAGGAATT GATGGTGCGC CGCGCGGTGT AA
 
Protein sequence
MKRIFEVYRY DPDKDAAPRM QTYEVELDGH ERMLLDALVK LKKLDESIAF RRSCREGVCG 
SDAMNINGKN GLACLTNMRE LPEKIVLRPL PGLPVVRDLI VDMTQFFNQY HSIKPYLIND
EPPPEKERLQ SPEEREELDG LYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS
RDQATSERLD NLEDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV