Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2117 |
Symbol | |
ID | 6286762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2232779 |
End bp | 2233507 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642625688 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_001899683 |
Protein GI | 187929196 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.065084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAC TCGGCCTTTC CCACCTCTGG ACCCAAGGCG ATATCGTCAC CCGCGCCACG GCGATTCTGC TGCTCATCAT GTCGCTCGCC TCGTGGATCG TCATCTTCAC CAAGGCGTGG GACATCGTGC GTCTGAAGTC GATGGCACAA GGCGCTGAAA AGCGTTTCTG GCACTCGGAC GATTTCGATC ACGCCATACA GACGCTCGGC TCGCCCAAGG ACAACCCGTT CCACGCGCTC GCGCAAACGG GCCGGGAAGC CGCGCAGCAC CACCGCGCCA GCCAGCCGCA GTTGCATGAT GTGATGGACA TCTCCGACTG GATCACGCGC TCGCTCAAGA GCGCCATCGA TGAGGCCGTG GGGCAAATGC AATCGGGCCT AGCCGTGCTG GCATCGGTCG GCTCGACCGC ACCGTTCGTC GGTCTGTTCG GCACGGTGTG GGGCATCTAT CACGCCCTGC TCGGGATCGG CGCCGTCGGC GTGCCCACCA TCGACAAAGT CGCCGGCCCC GTGGGTGAGT CGCTCATCAT GACGGCCTTC GGTCTGGCCG TGGCCATTCC GGCGGTGCTG GGCTACAACG CGCTCACGCG CGGCAACAAG GCCATCATCG CCAAGCTCAA CCGGTTCGCG CACGACCTGC ACGCCTATTT CGTGACGGGC GCGCGTCTGC GCCCAGGCGC CTCGCGTGAT GACGCCGGCG TGCGCCTAAC TGCGGTCAAG CAGCAGTAA
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Protein sequence | MQELGLSHLW TQGDIVTRAT AILLLIMSLA SWIVIFTKAW DIVRLKSMAQ GAEKRFWHSD DFDHAIQTLG SPKDNPFHAL AQTGREAAQH HRASQPQLHD VMDISDWITR SLKSAIDEAV GQMQSGLAVL ASVGSTAPFV GLFGTVWGIY HALLGIGAVG VPTIDKVAGP VGESLIMTAF GLAVAIPAVL GYNALTRGNK AIIAKLNRFA HDLHAYFVTG ARLRPGASRD DAGVRLTAVK QQ
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