Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2106 |
Symbol | |
ID | 6287059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2221483 |
End bp | 2223546 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625677 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_001899672 |
Protein GI | 187929185 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.849515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.994993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCA CACAGGTCAC TGGGCAAGTC ACCAAGCGCG ACGGTTCATT GGCGCCGTTC GATGCGCAGA AGATCCGACA GGCCATCGCC GCAGCCGGCC AGGCCACCGG CGAATTCGAC ACCATCGAGG CGCAGCACCT GACCTCAGGC GTGGTTGCAC ATCTTGCGCC GCTCCCCTGC CCAGGTATCG AAATCATCCA GAACTGCGTG GAAGAGGTGC TGGTGGACGC CGGCTATTGG CGCACCGCGC GCGCCTACAT CGTCTACCGC GAACAGCACG CCCGGCTGCG TTCGCTCAAG CACACGCTGG TCGATGTCGA AAGCACGATG GAGGAGTACC TCGAGCAGCG CGACTGGCGC GTCAACGCCA ACGCCAATCA GGGCTATAGC CTGGGCGGCC TGATCCTGAA CGTGGCGGGC AAGGTCACGG CCAACTACTG GCTTTCGCAC GTCTACAGCC CCGAAGCGGG CACGGCGCAC CGCGAGGGCG ACCTCCACAT CCACGATCTC GACATGCTCT CGGGCTACTG CGCAGGCTGG TCGTTGCGGC AGTTGCTGAC GGAGGGATTC AACGGCGTGC CGGGCAAGGT GGAGGCAACG CCGCCGCGGC ATATGTCCGC AGCCATCGGG CAGATCGTCA ACTTTCTGGG CACGCTGCAG AACGAGTGGG CCGGCGCGCA GGCGTTCAGT TCGTTCGATA CCTACATGGC GCCGTTCATC CGCCGCGACG CGATGTCGTA TGCCGCGGTC AAGCAGTCCA TGCAGGAACT GATCTACAAC CTGAACGTAC CCAGCCGCTG GGGCACGCAA ACGCCGTTCA CCAACCTCAC GTTCGACTGG ACTTGCCCGG CCGACCTGCG CGAACAGGTT CCTTACATCG GCGGCGAAGA GATGCCCTTC ACCTATGGCG ATCTCCAGCC CGAGATGGAC ATGATCAACC GCGCGTATAT CGAGGTCATG ATGGCCGGCG ATGCGAAAGA CCGCGCGTTC ACGTTCCCGA TACCGACCTA CAACATCACG TCGGACTTCG ATTGGGAGCA CCCAAACACA ACGTTGCTGT TCGAGATGAC GGCGCGCTAC GGGCTGCCCT ACTTCCAGAA CTTCCTCAAC TCCGATCTGG AGCCGCACAT GGTGCGCTCG ATGTGCTGCC GCCTGCAGCT TGACCTGCGC GAACTGCTCA AGCGCGGCAA CGGGTTGTTT GGCTCGGCTG AGCAGACCGG GTCCATCGGC GTCGTGACCG TCAACTGCGC ACGACTGGGG TATCTCTACG CGGGCGATGA GGCAGCGCTG CTGGCGCGGC TGGACACGCT GCTCGCCCTC GGCCGCGATG TGCTGGAGGT CAAGCGCAAG TTCGTGCAGC GGCTGATCGA TCAGGGGCTG TATCCATACA CGCGCCGCTA CCTGGGCACG CTGCGCAACC ACTTCAGTAC GCTGGGCGTG AACGGCATCA ACGAAATGGT GCGCAACTTC ACACACGATG CCGACGACAT CACCACGCCA TTCGGCCATG CCATGGCGGT GCGCCTGCTC GACCACGTAC GTCAGCGCAT GACGGAATTC CAGGAGGCGA CGGGGCACCT GTACAACCTT GAAGCCACAC CCGCAGAGGG CACTACCTAC CGCTTCGCCC GCGAAGACCG CAAGCGCTGG CCTGGCATCC TGCAGGCCGG CACGGCAGCG CAGCCGTATT ACACCAACTC AAGCCAGTTG CCCGTCGGCT ACACCGACGA TCCGTTTGAA GCGCTGGCGC GCCAGGAAGC ACTGCAGAGC AAGTACACGG GCGGCACGGT CCTGCACCTG TACATGAACG AAGCGATCTC ATCGCCGCAG GCATGCAAGG AACTCGTGCG CCGCGCGCTG GCCAACTTCC GCCTGCCGTA CATCACCATC ACCCCGACGT TTTCGATCTG CCCGAAGCAC GGCTATCTGT CCGGCCATCA CACGTTCTGT CCGAAATGCG ATGCAGATCT GCTGGCCCAG CAGCCCCACG GCAAGTGCGG CTGCACAGGG GCCGGCACCC CAGGTTCTTC CACCCACCTC CATCACGAAG GAGCCTCCGT ATGA
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Protein sequence | MTGTQVTGQV TKRDGSLAPF DAQKIRQAIA AAGQATGEFD TIEAQHLTSG VVAHLAPLPC PGIEIIQNCV EEVLVDAGYW RTARAYIVYR EQHARLRSLK HTLVDVESTM EEYLEQRDWR VNANANQGYS LGGLILNVAG KVTANYWLSH VYSPEAGTAH REGDLHIHDL DMLSGYCAGW SLRQLLTEGF NGVPGKVEAT PPRHMSAAIG QIVNFLGTLQ NEWAGAQAFS SFDTYMAPFI RRDAMSYAAV KQSMQELIYN LNVPSRWGTQ TPFTNLTFDW TCPADLREQV PYIGGEEMPF TYGDLQPEMD MINRAYIEVM MAGDAKDRAF TFPIPTYNIT SDFDWEHPNT TLLFEMTARY GLPYFQNFLN SDLEPHMVRS MCCRLQLDLR ELLKRGNGLF GSAEQTGSIG VVTVNCARLG YLYAGDEAAL LARLDTLLAL GRDVLEVKRK FVQRLIDQGL YPYTRRYLGT LRNHFSTLGV NGINEMVRNF THDADDITTP FGHAMAVRLL DHVRQRMTEF QEATGHLYNL EATPAEGTTY RFAREDRKRW PGILQAGTAA QPYYTNSSQL PVGYTDDPFE ALARQEALQS KYTGGTVLHL YMNEAISSPQ ACKELVRRAL ANFRLPYITI TPTFSICPKH GYLSGHHTFC PKCDADLLAQ QPHGKCGCTG AGTPGSSTHL HHEGASV
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