Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2102 |
Symbol | |
ID | 6288188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2216906 |
End bp | 2218429 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625673 |
Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
Protein accession | YP_001899668 |
Protein GI | 187929181 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.228521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.564936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA TTCGTCAAGA AGACCTCATC CAGAGCGTCG CCGACGCGCT GCAGTACATC AGCTACTACC ACCCGATGGA CTACATCACT GCTCTGGGCC GCGCCTATGA GCAGGAGCAG AGCCCGGCGG CCAAGGATGC CATCGCGCAG ATCCTGACCA ACAGCCGCAT GTGCGCCGAA GGCAAGCGCC CGATCTGTCA GGACACCGGC ATCGTCACCG TGTTCCTGAA GGTCGGCATG AACGTGCGCT GGGACGGCGC CACGATGAGC CTGGAAGACA TGGTCAACGA AGGCGTGCGC CGCGCGTACA ACGACGTCGA CAACAAGCTG CGTGCAAGCG TGCTGGCTGA TCCCGCTGGC AAACGCACCA ACACGAAGGA CAACACCCCG GCCGTGATCA ACATGTCGAT CGTGCCGGGC GACACAGTGG ACGTGATCGT CGCGGCCAAG GGCGGCGGCT CCGAAGCCAA GTCGAAGTTC GTGATGCTGA ATCCGTCGGA TTCGATCGTC GACTGGGTGC TCAAGACCGT GCCGACCATG GGCGCCGGCT GGTGCCCGCC GGGCATGCTG GGCATCGGCA TTGGCGGCAC GGCTGAAAAG GCCATGCTGC TGGCCAAGGA AGCCCTGATG GAGCCGATCG ACATTCAAGA CCTGATCGCC CGCGGCCCCA GCAACCGCGC AGAAGAACTG CGCATCGAGC TGTATGAGAA GGTCAACGCG CTGGGCATTG GCGCGCAAGG CCTGGGCGGC CTGGCCACCG TGCTCGACGT GAAGATCCTG GACTACCCGA CGCACGCAGC CAACCTGCCG GTTGCCATGA TCCCGAACTG CGCCGCCACG CGCCACGCGC ACTTCACCCT GGACGGCAGC GGCGTTGCCA AACTGGAAGC GCCGGACCTG TCGCAATGGC CGAAGGTCGA GTGGGCACCG AACACGGAAA CGTCGAAGCG CGTCGACCTG AATACGCTCA CGCCGGAAGA AGTTGCCTCG TGGAAGCCCG GCCAGACGCT GCTGCTGAAC GGCAAGATGC TGACGGGTCG CGACGCCGCA CACAAGCGCA TCGCCGACAT GCTCGCCAAG GGCGAAAAGC TGCCGATCGA CTTCACCAAC CGCGTGATCT ATTACGTCGG CCCGGTCGAC CCGGTGCGCG ATGAGGTTGT CGGCCCGGCA GGCCCGACCA CGGCCACGCG CATGGACAAG TTCACCGAGA CGATGCTCGC CCAGACGGGT CTGATCGCCA TGGTGGGCAA GGCCGAGCGC GGCCCGGTCG CCATCGAGTC CATCAAGAAG CACAAGTCGG CTTACTTGAT GGCCGTGGGC GGCGCGGCGT ACCTGGTGTC GAAGGCCATC CGCGGCTCGA AGGTGCTGGC GTTCGAAGAC CTTGGCATGG AAGCCATCTA TGAGTTTGAC GTGAAGGACA TGCCTGTCAC CGTGGCCGTG GACAGCTCGG GCACGTCGGT CCACAAGACC GGCCCGGCGG AATGGCAAGC GAAGATCGGC AAGATTCCGG TCGCAGCGGG CTGA
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Protein sequence | MTVIRQEDLI QSVADALQYI SYYHPMDYIT ALGRAYEQEQ SPAAKDAIAQ ILTNSRMCAE GKRPICQDTG IVTVFLKVGM NVRWDGATMS LEDMVNEGVR RAYNDVDNKL RASVLADPAG KRTNTKDNTP AVINMSIVPG DTVDVIVAAK GGGSEAKSKF VMLNPSDSIV DWVLKTVPTM GAGWCPPGML GIGIGGTAEK AMLLAKEALM EPIDIQDLIA RGPSNRAEEL RIELYEKVNA LGIGAQGLGG LATVLDVKIL DYPTHAANLP VAMIPNCAAT RHAHFTLDGS GVAKLEAPDL SQWPKVEWAP NTETSKRVDL NTLTPEEVAS WKPGQTLLLN GKMLTGRDAA HKRIADMLAK GEKLPIDFTN RVIYYVGPVD PVRDEVVGPA GPTTATRMDK FTETMLAQTG LIAMVGKAER GPVAIESIKK HKSAYLMAVG GAAYLVSKAI RGSKVLAFED LGMEAIYEFD VKDMPVTVAV DSSGTSVHKT GPAEWQAKIG KIPVAAG
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