Gene Rpic_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2101 
Symbol 
ID6288187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2216177 
End bp2216716 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content61% 
IMG OID642625672 
Producthypothetical protein 
Protein accessionYP_001899667 
Protein GI187929180 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.175881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.49371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGC CCATCGCCCC GCTGCGCCCG ATTCCGCGCC TGATTTTCTT TTCCCGCTGG 
CTGCAACTGC CGCTTTACCT GGGGCTGATC ATCGCCCAGG CAGCGTATGT GTACCTCTTC
GTCGTCGAGG TGTGGCACCT GGTTTCGCAC CTGGGCGACC TGGACGAAAC CAAGATCATG
CTGGCCGTGC TGGGCCTGAT CGACGTGGTC ATGATCTCCA ACCTGCTGAT CATGGTGATC
ATCGGGGGGT ACGACATCTT CGTTTCCAAG CTCGGCATCG AGGGCCATGA AGACGAGCCC
GAGTGGCTGG ACCACGTCAA CGCGGGGGTG CTGAAGGTGA AGCTGTCGAT GGCGCTGATC
AGCATCTCGT CGATCCACCT GCTCAAGACG TTCATCGACG CTGCCCAGAA AGATACGCAC
ACGATCCTGT GGCAGGTGGT GATCCACGTA GCGTTCCTGG TGTCTGCGCT GGTGATGGCC
TGGGTGGACC GCATCGTTTC GCACGCGCAT CCGCACGGCG AGGCTGCCGA CGCACATTGA
 
Protein sequence
MKSPIAPLRP IPRLIFFSRW LQLPLYLGLI IAQAAYVYLF VVEVWHLVSH LGDLDETKIM 
LAVLGLIDVV MISNLLIMVI IGGYDIFVSK LGIEGHEDEP EWLDHVNAGV LKVKLSMALI
SISSIHLLKT FIDAAQKDTH TILWQVVIHV AFLVSALVMA WVDRIVSHAH PHGEAADAH