Gene Rpic_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2079 
Symbol 
ID6289560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2187846 
End bp2188463 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content63% 
IMG OID642625649 
Productputative lipoprotein 
Protein accessionYP_001899645 
Protein GI187929158 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.983785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ACCTCATTAG CCGCCAGACC ATCGTCACCC GCGCCGCCGC GCTTGCTGCT 
GTCGCACTGC TCGGTACCCA GATCGCGGCC TGTACCACGA CCAGCCCCAA TGCACAGGGC
TCAGATGTGA TGTCGTCCAC CAACAAGCAC GCCACCACCA ACTCGCAGGC AGATTCCGTG
CTCTCGCGCC TGTACACCAC GGCCAGCGGC TCGCGTGAGC TGGTGGGACG CGCCAAGGGC
GTGCTGGTGT TCCCGTCGGT GCTGAACGCC GGCTTTGTGG TGGGAGGCCA ATACGGTGAA
GGCGTGCTGC GTACCGGCGG TGGCCGTCCG CTGGGCTACT ACAACATCGC CTCGGCGTCG
GTAGGCTTCC AGGCTGGCGC GCAGTCGCGT GCGCTCATCA TCCTGTTCAT GACGGACGAA
GCGCTGCAGA AATTCCAGAA CAGCCAAGGC TGGACAGCCG GCGTGGATGC CACCGTGGCC
CTGGCAAAGA TCGGCGTGAA CGGCGCGGTC GATACCAACA CCGCGCAGCA ACCGATCATC
GGCTTCAACC TGACCAACGC AGGTCTGATG GCCGGCGCGT CGATCGAAGG CACGAAGATC
ACGAAGCAGA ACAACTGA
 
Protein sequence
MKKNLISRQT IVTRAAALAA VALLGTQIAA CTTTSPNAQG SDVMSSTNKH ATTNSQADSV 
LSRLYTTASG SRELVGRAKG VLVFPSVLNA GFVVGGQYGE GVLRTGGGRP LGYYNIASAS
VGFQAGAQSR ALIILFMTDE ALQKFQNSQG WTAGVDATVA LAKIGVNGAV DTNTAQQPII
GFNLTNAGLM AGASIEGTKI TKQNN