Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2073 |
Symbol | |
ID | 6288138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2182803 |
End bp | 2183531 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625643 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_001899639 |
Protein GI | 187929152 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.466344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.632153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACAGA TCATTCTCGA TACCGAAACC ACCGGCCTGA ATGCCGCCAC GGGCGACCGC GTGATCGAAA TCGGTTGCGT GGAGATGGTC AACCGCCGCC TGACCGGCCG GAACCTGCAC TTCTACATCA ACCCGGAGCG TGAGATCGAC GCGGGCGCGA TGGCTGTGCA CGGCATCACC AACGAGTTCG TGGCTGACAA GCCGAAGTTC GCCGAGATCG TCAACGAGAT CCGCGACTAC GTGCAGGGCG CCGAAGCGAT CATCCACAAC GCCGCGTTCG ACTTGGGCTT CCTGGACATG GAATTCCAGC GCCTGGGCCT GCCAGCCTTC CGTGAGCACC TCTCGGGCCA CATCGACACG CTGCGCGAGG CGCGCCAGAT GTTCCCTGGC AAGCGCAACT CGCTGGATGC GCTGTGCGAC CGTCTGGGCG TGAGCAACGC GCACCGTACG CTGCACGGCG CACTGCTGGA TGCGGAACTG CTGGCCGAGG TCTACCTCGC CATGACGCGC GGCCAGAACA CGCTGGTGAT CGACATGCTG GAGTCGGGCG AGGGCGCGTC GGCCGAAGCC GTTGCCGTCG ACCTGAGCGC GTTGCAACTG CCGGTGCTGC TGGCGACCGA AGCGGAGGCC GAAGCGCACG CCGGCGTGCT CAAGGAGATC GACAAGGCCA GCGGCGGCAA GACCGTTTGG ACGCGTGAAC CCGTGGAATC TGCGCAGCCG GCTGCCTGA
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Protein sequence | MRQIILDTET TGLNAATGDR VIEIGCVEMV NRRLTGRNLH FYINPEREID AGAMAVHGIT NEFVADKPKF AEIVNEIRDY VQGAEAIIHN AAFDLGFLDM EFQRLGLPAF REHLSGHIDT LREARQMFPG KRNSLDALCD RLGVSNAHRT LHGALLDAEL LAEVYLAMTR GQNTLVIDML ESGEGASAEA VAVDLSALQL PVLLATEAEA EAHAGVLKEI DKASGGKTVW TREPVESAQP AA
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