Gene Rpic_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2073 
Symbol 
ID6288138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2182803 
End bp2183531 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID642625643 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001899639 
Protein GI187929152 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.466344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.632153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAGA TCATTCTCGA TACCGAAACC ACCGGCCTGA ATGCCGCCAC GGGCGACCGC 
GTGATCGAAA TCGGTTGCGT GGAGATGGTC AACCGCCGCC TGACCGGCCG GAACCTGCAC
TTCTACATCA ACCCGGAGCG TGAGATCGAC GCGGGCGCGA TGGCTGTGCA CGGCATCACC
AACGAGTTCG TGGCTGACAA GCCGAAGTTC GCCGAGATCG TCAACGAGAT CCGCGACTAC
GTGCAGGGCG CCGAAGCGAT CATCCACAAC GCCGCGTTCG ACTTGGGCTT CCTGGACATG
GAATTCCAGC GCCTGGGCCT GCCAGCCTTC CGTGAGCACC TCTCGGGCCA CATCGACACG
CTGCGCGAGG CGCGCCAGAT GTTCCCTGGC AAGCGCAACT CGCTGGATGC GCTGTGCGAC
CGTCTGGGCG TGAGCAACGC GCACCGTACG CTGCACGGCG CACTGCTGGA TGCGGAACTG
CTGGCCGAGG TCTACCTCGC CATGACGCGC GGCCAGAACA CGCTGGTGAT CGACATGCTG
GAGTCGGGCG AGGGCGCGTC GGCCGAAGCC GTTGCCGTCG ACCTGAGCGC GTTGCAACTG
CCGGTGCTGC TGGCGACCGA AGCGGAGGCC GAAGCGCACG CCGGCGTGCT CAAGGAGATC
GACAAGGCCA GCGGCGGCAA GACCGTTTGG ACGCGTGAAC CCGTGGAATC TGCGCAGCCG
GCTGCCTGA
 
Protein sequence
MRQIILDTET TGLNAATGDR VIEIGCVEMV NRRLTGRNLH FYINPEREID AGAMAVHGIT 
NEFVADKPKF AEIVNEIRDY VQGAEAIIHN AAFDLGFLDM EFQRLGLPAF REHLSGHIDT
LREARQMFPG KRNSLDALCD RLGVSNAHRT LHGALLDAEL LAEVYLAMTR GQNTLVIDML
ESGEGASAEA VAVDLSALQL PVLLATEAEA EAHAGVLKEI DKASGGKTVW TREPVESAQP
AA