| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2038 |
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| Symbol | |
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| ID | 6288455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2147919 |
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| End bp | 2149469 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625607 |
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| Product | MLTD_N domain protein |
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| Protein accession | YP_001899604 |
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| Protein GI | 187929117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.464579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCCG TGCGACTTCT TGCGGCAACT GTGCTCAGTC TGCTCCTTGC GGCCTGTGCA
ACGGCCCCCG GGCCGAACGC CGACACAGCC AGCACCAGCG CCTCCACCGC CACCGGCCAG
GCCCCCGCGC CGGTCGTCAA TGTCGATCAG CAGCCCGTGG CATCCCTGAA AGGGCCTGCC
AAGGATCTCT GGGCGCGCAT TCGCCAAGGT TTCTCCATGC CCGACCTGCA AAGCTCGGCT
GTGGACGACC GCACTGACTG GTATGCGCAG CGCCCGGATG CCTTCCGCCG GATGGTGGAT
CGCTCGAACC GCTACCTGTA CCACATCGTC GAAGAGCTGG AGCGGCGCAA CATGCCCACC
GAGCTGGCGC TCCTGCCGTT CGTGGAAAGT GCGTTCAACC CGCAGGCAGT ATCGACTGCC
AAGGCTGCCG GGATGTGGCA GTTCATCCCG AGCACTGGCC GAACCTACAA CCTCAAGCAG
AACGTCTTCC AGGACGAGCG CCGCGATGTG CTTGCCTCGA CCGACGCCGC GCTCGACTAT
CTTTCCAAGC TGCACGACCA GTTTGGCGAC TGGCAACTCG CGCTGGCCGC CTACAACTGG
GGTGAAGGCG CGGTGGCGCG GGCGATTGCA CGCAACCAGG CCGCGGGGCT GTCGACCGAT
TACGTCAACC TAAACATGCC CGCCGAGACG CGCATGTACG TGCCCAAGCT CCAGGCGGTG
AAGAACATCA TCGCCAACCC GGAGCGCTAC GGCGTCACGC TGCCGGAAAT TCCCAACCAT
CCGTACTTCG TCACCGTCAC GACTTCACGC GATATTGATG TGACGCTGGC TGCCAAGCTG
GCCAATCTGC CAATGGATGA GTTCAAGGCG CTGAACCCGT CGTTCAACCG GCCGGTGATC
CTGGGCGCGT CGAACCCGCA GATCCTGCTG CCGTACGACA ACGCGGAAAC TTTCCAGTAC
AACCTGAACA CCTATCGAGG CGGCCTCTCC AGCTGGACGG CCGTGACGGT CGGCAACCGC
GAGCGCGTCG AAGCATTGGC GGCCCGGCTG AAGGTTGACC CCGACACCAT TCGCGAGATC
AACCGCATTC CGAAGGGCAT GCGGCTGAAG GCCGGCTCCA CCGTGGTTGT GCCGCGTGCC
GACGGCGCCC AGGAAAACGC TCCCGACATC AGCCCGGAGT TGGCCGAGAA CGCCACCATG
GCGGTCGAAC CCGACATGCC GGATCTGAGA AAGGTGGTCG TGCGCGCAGG CAAGCGCGAT
ACGGTTGCGG GTCTGTCGCG ACGCTACGGC GTGTCGGTTG CCCAGATTCG TGCGTGGAAC
CAGCTCCCCG GCGACGCCAT TCCCAAGGGG CACAGCGTTG TGCTGATGCT GCCGCAAGCG
CACGGTGGCG GTCGTGGCGG GCATGTGCGC GTGATGCGCG TATCGGCCAC AACGTCGCGT
GCCACAGCGG CAACCACGCG CGTGCCAACT GCGAAGGTGG CCGGCAAGCC GGTGGTCAAG
GCGAAGCCGG TGGCAACTTC ATCCAGTTCG GTCAAGCGCA AGAAGCGCTG A
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| Protein sequence | MRSVRLLAAT VLSLLLAACA TAPGPNADTA STSASTATGQ APAPVVNVDQ QPVASLKGPA
KDLWARIRQG FSMPDLQSSA VDDRTDWYAQ RPDAFRRMVD RSNRYLYHIV EELERRNMPT
ELALLPFVES AFNPQAVSTA KAAGMWQFIP STGRTYNLKQ NVFQDERRDV LASTDAALDY
LSKLHDQFGD WQLALAAYNW GEGAVARAIA RNQAAGLSTD YVNLNMPAET RMYVPKLQAV
KNIIANPERY GVTLPEIPNH PYFVTVTTSR DIDVTLAAKL ANLPMDEFKA LNPSFNRPVI
LGASNPQILL PYDNAETFQY NLNTYRGGLS SWTAVTVGNR ERVEALAARL KVDPDTIREI
NRIPKGMRLK AGSTVVVPRA DGAQENAPDI SPELAENATM AVEPDMPDLR KVVVRAGKRD
TVAGLSRRYG VSVAQIRAWN QLPGDAIPKG HSVVLMLPQA HGGGRGGHVR VMRVSATTSR
ATAATTRVPT AKVAGKPVVK AKPVATSSSS VKRKKR
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