Gene Rpic_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2020 
Symbol 
ID6286881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2126504 
End bp2127832 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content64% 
IMG OID642625589 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001899586 
Protein GI187929099 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.531342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCT TCTGGACCCG CTTTGCCGTC TTTGCCGCCC TCATGGGCAT CGTCACGGCA 
TGCCTGTATA TCTTCGTCGA CCACGTCGCT GCGCTGGCGG TGCTCAGCGC CATGCTGTTA
GCGATGCTCC TGTATTACAT CTACCAGATC CAGCGCCTGT GGCGCGTGCT GGACTCGCCG
GCCTATGGCG AGATCCCCAG CGCGCTCGGC CTGTGGGGCG AGGTCTACTA CCGCCTGCAC
CGTTTGATGA AGGGCTGGCG CACCCAGGTG CTGCAAGTCG AACAACAGCA CAGCCGCTTC
ATCCAGGCCA TTCAGGCATC GCCCAACGGC GTGCTGATGC TTGACGGTGA AGACCAGATC
GAATGGTGCA ACGCGGTAGC CGAAGAGCAC TTCGGGCTCT CTGCCAAGCG TGATCTGCGC
CAACGCATTA CCCACCTGAT CCGCCGACCG GAGTTCGTGC GCTACCTGGC GCGCGGCGAG
TTCGAGGAGC CGCTCACCAT GCATGACGTG GGCCCGCACA AGCAAAGCAT CATCTCCGCC
CAGATCTTGC CGTATGGCGA AGACCGCAAG CTGCTGGTGT CTCAGGACAT CACCAAGCTG
GAGAACACCG AAGCGATGCG CCGCGATTTC GTGGCCAACG TCTCGCACGA GCTGAAGACA
CCGCTGACCG TGCTCTCGGG CTTTCTCGAG ACGGTGCGCG ATATCCCGCT GCCGGAAGAA
GACAAGCGGC GCTACCTGGA CATGATGCAC ACGCAGGCCA TGCGCATGCA GCATCTGGTG
GAAGACTTGC TGGCGCTCGC CACGCTCGAA GGCAATCCCG AGCCGCCGTC TCTGGCGCCG
GTGCCGATGC AGCGCATGAT GCTGCAGCTC CAGCACGATA TCGAAGCGCT GTCGGCGGGC
CGGCACACCG TCAGCATGAC ATGCGATCCG GCCGTGAGCG TGTGCGGCGC CGAGCTTGAA
TTGCTTTCCG CGTTCAGCAA CCTGGCATCC AACGCGGTGC GCTATACGCC GGATGGCGGC
ACGATCCGTC TCGATTGGGG CGTGCGCGAC GGGCACGCGG TGTACTCCGT CACCGACACG
GGGATTGGCA TTGCACCCGA GCATATCCCG CGGCTGACCG AGCGTTTCTA TCGCGTGGAC
CGCAGCCGTT CACGCGACAC CGGGGGTACC GGCCTAGGCT TGGCTATCGT CAAGCACGTG
CTGTCGCGCC ACGGTGGAGA GTTGCAGGTG ACCAGCGAGC ACGGCAAGGG CAGCACCTTC
CGCGCCGTCT TCCCGCCAGA GCGCACGATC GTGCGCAGCG CCTCCGTTGC TGATGAGCGC
GTCGCCTGA
 
Protein sequence
MNVFWTRFAV FAALMGIVTA CLYIFVDHVA ALAVLSAMLL AMLLYYIYQI QRLWRVLDSP 
AYGEIPSALG LWGEVYYRLH RLMKGWRTQV LQVEQQHSRF IQAIQASPNG VLMLDGEDQI
EWCNAVAEEH FGLSAKRDLR QRITHLIRRP EFVRYLARGE FEEPLTMHDV GPHKQSIISA
QILPYGEDRK LLVSQDITKL ENTEAMRRDF VANVSHELKT PLTVLSGFLE TVRDIPLPEE
DKRRYLDMMH TQAMRMQHLV EDLLALATLE GNPEPPSLAP VPMQRMMLQL QHDIEALSAG
RHTVSMTCDP AVSVCGAELE LLSAFSNLAS NAVRYTPDGG TIRLDWGVRD GHAVYSVTDT
GIGIAPEHIP RLTERFYRVD RSRSRDTGGT GLGLAIVKHV LSRHGGELQV TSEHGKGSTF
RAVFPPERTI VRSASVADER VA