Gene Rpic_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2017 
Symbol 
ID6287587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2121628 
End bp2122461 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID642625586 
Producthypothetical protein 
Protein accessionYP_001899583 
Protein GI187929096 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGACC TGCCGACGCC CACCCAGCCA TTGATCGACG CACTGCCGAG CCTGAACCTG 
GGCAACGCTC GGAGGGGCCT TCCTCGCTCG CCCGACGCTG TTCCGGCGCG TGACAAGCCT
GTTCTGGCCG TTTCGTGGGC GCGCCATCAG GATGAAGTGA CCGAAGCGCA GCGCCTGCGC
TACAAGGTGT TTGCCGAAGA AATGGGCGCC CGCCTGCCCT CGGCCCACAC GGAACTGGAC
GTCGACATGT TCGACGCCGT GTGCGACCAC CTGATCGTGC GCGACCAGAA GACGCTCCGC
GTGGTCGGCA CCTACCGCGT GCTGCGCCCG GACGCCGCCA AGCAGATCGG TTGCCTGTAT
TCCGAATCCG AATTCGACCT CGTGCGCTTG GCGCACTTGC GTCCGAAGAT GGTCGAGCTT
GGCCGCTCGT GCGTGCACCG CGACTACCGC TCGGGCAGCG TCATCATGGC GCTGTGGGCC
GGCCTGGGCG AATACATGCA GCGCTACGGT TTCGAATCGA TGCTGGGCTG CGCAAGCGTG
TCGATGGGCG ATGGCGGTCA CTTTGCAGCC AGCCTGTATC GCAGCTTCGT TGACGATGGC
TCGCTCGCAC CGATCGAGTA TCACGCCTTC CCGCGCGTGG CACTGCCGGT GGACGAACTG
AACCAGGATC TCGAAGTCGA GCCGCCTGCG CTCGTGAAGG GCTATCTGCG CCTGGGCGCA
CGCATCTGCG GTGCACCGGC CTGGGACCCT GACTTCAACG TCGCCGACTT CCTCACGCTG
CTGCGCCTGT CGGACATCAA CCCGCGCTAC GCACGCCACT TCCTGCGCGG CTGA
 
Protein sequence
MRDLPTPTQP LIDALPSLNL GNARRGLPRS PDAVPARDKP VLAVSWARHQ DEVTEAQRLR 
YKVFAEEMGA RLPSAHTELD VDMFDAVCDH LIVRDQKTLR VVGTYRVLRP DAAKQIGCLY
SESEFDLVRL AHLRPKMVEL GRSCVHRDYR SGSVIMALWA GLGEYMQRYG FESMLGCASV
SMGDGGHFAA SLYRSFVDDG SLAPIEYHAF PRVALPVDEL NQDLEVEPPA LVKGYLRLGA
RICGAPAWDP DFNVADFLTL LRLSDINPRY ARHFLRG