Gene Rpic_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2007 
Symbol 
ID6286531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2113897 
End bp2114730 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content67% 
IMG OID642625575 
Productaldo/keto reductase 
Protein accessionYP_001899573 
Protein GI187929086 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.664286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG TCACTCTGCC CAACGGCGAA CGCGTCCCTG CACTCGGCAT GGGCACCTGG 
AACATGGGCG ACGACCGCGC CACGCGCGCC GAAGAAATCG CCACGCTGCG CCTGGGCCTC
GACCTGGGTT TGCGCCTGAT CGACACCGCC GAGATGTACG GCGAAGGCCT CTCTGAATCG
CTGATTGGCG AGGCCATTGC CGGGCGGCGC GATGAAGTCT TTCTGGTGAG CAAGGTCTAT
CCGCACAACG CCAGTCGGCG CGGCATTGCT GCGGCGTGCG AGCGCAGCCT GCGCCGCCTC
GGCACCGACC GCCTCGATCT GTACCTGCTG CACTGGCGCG GCGATGTGCC GTTCGACGAC
ACGCTGGAAG GCCTGCAGGC CCTGCAGCGC GAGGGCAAGA TCCGCCAGTA CGGCGTGAGC
AATCTCGACC TCTCCGACAT GCAGGAATGG TGGGACGTGC CCGGCGGCGA TCAGATTGCC
GTCAACCAGC TGCTCTACAA CCTCAGCCGG CGCGGCATCG AATGGGATGT GTTGCCCTGG
CTGCGCGAGC GCCGTGTGCC GGTGATGGCC TATTCGCCCA TCGAGCAGGC GCGGCTCATT
CGGCATCCGA AGCTGGTGCG CTTCGCGCAG GCGTGCGGCA TGACGCCGGC ACAGGTGGCG
CTGGCGTGGC TGCTGGCGCG CGACGACATC ATCGCGATTC CCAAGACCGG CCATCGTGAC
CGGCTGCGCG AAAACATCGG CGCGTTATCG CACACGCTCA CGGCTGAGCA GCTTGCGATG
CTGGACAGCA TCTTCCCGCC GCCCAAGGGG CCGAGCGCGC TGGAGATGCT GTAA
 
Protein sequence
MKHVTLPNGE RVPALGMGTW NMGDDRATRA EEIATLRLGL DLGLRLIDTA EMYGEGLSES 
LIGEAIAGRR DEVFLVSKVY PHNASRRGIA AACERSLRRL GTDRLDLYLL HWRGDVPFDD
TLEGLQALQR EGKIRQYGVS NLDLSDMQEW WDVPGGDQIA VNQLLYNLSR RGIEWDVLPW
LRERRVPVMA YSPIEQARLI RHPKLVRFAQ ACGMTPAQVA LAWLLARDDI IAIPKTGHRD
RLRENIGALS HTLTAEQLAM LDSIFPPPKG PSALEML