Gene Rpic_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1992 
Symbol 
ID6289850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2102485 
End bp2103309 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID642625560 
Productalpha/beta hydrolase fold 
Protein accessionYP_001899559 
Protein GI187929072 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.45941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGA CCGTACAAAG CGAGCGCGCC TACGCCTACA CCGGCGGCAA ACCGTTCAAC 
GCCGAACTGC CCTGCGTCGT CTTCGTGCAT GGCGCGCAGA ACGACCATTC GGTCTGGGGC
CTGCAGACGC GATGGTTCGC GCATCACGGC TTCAGCGTGC TGGCGGTCGA TCTGCCGGGC
CACGGTCGCA GCGCCGGCGC CCCTCTGCAG ACCGTGGAAG CCATGGCCGA CTGGGTGATG
GCGCTCGTGC ACGCAGCCGG CGTCACCCAG CCAGTGGTTG TGGTCGGCCA CAGCATGGGC
TCGCTGATTG CGCTGGAGTG CGCGTCACGG TACGCCAGTC GCGTGCGCCG CATCGCGCTG
GTAGCGACGG CCTGGCCGAT GAAGGTGTCG GATGCGCTGC TTGACGCCGC GCTCAACAAC
ACGCCGGCCG CCATTGATAT GGTGAATACC TGGTCGCATT CCAGCCTGGC GAACAAGCCG
TCAGCGCCGG GGCCGGGCTT CTGGATGCAT GGCGGCAGCC AGCGGCTGAT GGAACGGATA
GCGCGCGGCA CGGACGCGCC CGTCTTCCAC ACAGATTTTG CTGCCTGCAA TGCCTATGCG
CGCGGCGCCG AAGCCATGGC CGCCGCGAAG TGCCCGTCAC TCGTGATTGT GGGAGAAAAA
GATCAGATGA CGCCAGCAAA AGCCGGCCGT CAGGTTGCGG CAGGACTGGC CGGCAGCCGC
GTTGTGGGGC TGCCTGGCGG GCACGCGATC ATGGGAGAAT GCCCCGACGG CACACTCGAC
GCGCTGATCG CCTTTGCACG CGAACGAGAC ACGGTCGCCG CATAA
 
Protein sequence
MEWTVQSERA YAYTGGKPFN AELPCVVFVH GAQNDHSVWG LQTRWFAHHG FSVLAVDLPG 
HGRSAGAPLQ TVEAMADWVM ALVHAAGVTQ PVVVVGHSMG SLIALECASR YASRVRRIAL
VATAWPMKVS DALLDAALNN TPAAIDMVNT WSHSSLANKP SAPGPGFWMH GGSQRLMERI
ARGTDAPVFH TDFAACNAYA RGAEAMAAAK CPSLVIVGEK DQMTPAKAGR QVAAGLAGSR
VVGLPGGHAI MGECPDGTLD ALIAFARERD TVAA