Gene Rpic_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1963 
Symbol 
ID6288002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2073640 
End bp2074713 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID642625529 
ProductDNA polymerase IV 
Protein accessionYP_001899530 
Protein GI187929043 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAAGA TCATCCACTG CGACTGCGAC TGTTTTTACG CTGCCATCGA AATGCGCGAC 
GATCCGCGCC TCGTTGGCAA GCCGCTGGCT GTCGGTGGAC GGCCGGAGCG GCGCGGCGTG
GTCGCGACTT GCAACTACGA AGCGCGCAAG TTCGGCATTC ATTCGGCGAT GCCCATGGCG
CAGGCCGTCA AGCGCTGCCC GGACTTGCTG ATCGTGCCGC CGTCCATGGA GAAGTACCGC
CAGGTTGCGC GCCAGATCTT CGCCATCTAT CACAGCTACA CGCCGCTGGT GGAGCCGCTC
TCGCTGGACG AGGCATATCT GGATGTGACC GACAGCCCGA TGCTCGCCGG CAGCGGCACC
CGCATCGCAG AAGACATCCG CCGCCGCGTG CGCGAAGAGA TCGGCATTAC CGTATCGGCG
GGCGTTGCGC CCAACAAGTT CATCGCCAAG ATTGCCAGCG ACTGGAACAA GCCCGATGGC
CTGTTCGTCG TGCGGCCGGA GCAGATCGAC GCGTTTGTTG CGGAGTTGCC GGTGGACCGC
CTGTTCGGGG TGGGCAAGGT GACCGCTGCG AAGCTGCGTC GCCTGGGCGC AGAAACCTGT
GGTGACTTGC GCGCCTGGGG CACCGACCGC TTGCAGCAGC ATTTCGGCGT GTTCGGTTTC
CGGCTCCACG ACCTTTGCCG AGGCATCGAC CATCGGCAGG TGCAACCTTC GCAGATCCGC
AAGTCGGTCA GTGTGGAAGA AACGTACGCC ACCGATCTGC GCACGCTCGA CGACTGCCAG
CGTGAGCTGA TCATCCTCGT CGAGCAGCTT GCCGCCCGCG TCGAGCGTGC GCGCGCAGGC
AACATGATCC ACAAAACCTA CGTCAAGCTG CGTTTTGCCG ATTTTCGTGG CACGACGGTG
GAGTGCATCT CGCCCCAGGT GTCCTTGCCG GTGTTCTCCA AGTTGCTGGC GCAGGGGTTT
GAGCGCCGCG GCATTCCCGT GCGGTTGCTC GGCGTGGGCG TGCGCTTGTA CGAGTCCGAC
GCGCACGCGC GCCAGCAACC GCTGTTTGCC GAAGACCCGG CCGCCACCAG CTGA
 
Protein sequence
MRKIIHCDCD CFYAAIEMRD DPRLVGKPLA VGGRPERRGV VATCNYEARK FGIHSAMPMA 
QAVKRCPDLL IVPPSMEKYR QVARQIFAIY HSYTPLVEPL SLDEAYLDVT DSPMLAGSGT
RIAEDIRRRV REEIGITVSA GVAPNKFIAK IASDWNKPDG LFVVRPEQID AFVAELPVDR
LFGVGKVTAA KLRRLGAETC GDLRAWGTDR LQQHFGVFGF RLHDLCRGID HRQVQPSQIR
KSVSVEETYA TDLRTLDDCQ RELIILVEQL AARVERARAG NMIHKTYVKL RFADFRGTTV
ECISPQVSLP VFSKLLAQGF ERRGIPVRLL GVGVRLYESD AHARQQPLFA EDPAATS