| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1944 |
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| Symbol | |
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| ID | 6288429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2049842 |
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| End bp | 2051623 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625510 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001899511 |
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| Protein GI | 187929024 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0868874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000336212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGTGG TGGAAATCAA GGTGCCGGAC ATCGGCGATT TCGATGCGGT GGAAGTCATC
GAAGTGCTGA TCAAGGCGGG CGATACCGTG GCGCCCGAGC AGTCGCTGAT CGTGCTGGAA
TCCGACAAGG CCAGCATGGA AGTGCCGTCG GAGGTGGCTG GCAAGATCGT CGACGTAAAA
GTCAAGGTGG GCGACAAGGT CAGCAAGGGC ACGGTGATCG CGACGGCGGA AGCTGGCGCG
GCTGCTGCTC CAGGACCTGC ACAAGCGCCG GCTCCGGCCC CAGCACCGGC TGCCGCACCG
GCAGCATCAG CCCCGGCACC GCAAGCGGCC AAGCACGCCG GCGGCGCCGA CATCGAGTGC
GAGATGCTCG TCCTGGGCTC CGGCCCGGGC GGTTATTCGG CCGCATTCCG CAGTGCGGAT
CTGGGCATGA ACACTGTGCT GGTGGAGCGT TTCTCAACGC TGGGCGGCGT TTGCCTGAAC
GTGGGGTGTA TCCCGTCGAA GGCGTTGCTG CACACGGCGG CCGTCATGGA CGAAGTCAAG
GCGATGGCCG CACACGGCAT TGTCTACAGC GAGCCGACGG TTGATATCAA CCAACTGCGC
AAGCACAAGG AGTCCGTCAT CGGCAAGCTG ACCGGCGGGC TGGCCGGCAT GGCCAAGGCA
CGCAAGGTGC AGGTCGTGCG CGGTGTTGGC ACGTTCCTGG ATCCGAATCA CCTCGAAGTG
CAACTGACGG ACGGCGACGG CAAGGCAACG ACGGGCGAGA AGAAGGTCAT CCGTTTTGCC
AAGGCGATCA TCGCTGCAGG CAGCGAGGCC GTGAAGCTGC CGTTCATTCC GGAAGATCCG
CGCATCGTCG ATTCGACCGG CGCGCTGGAG CTGCGCGAAG TGCCGGGCAG GATGCTGGTC
ATCGGGGGCG GCATCATCGG CCTGGAAATG GCGACCGTGT ACAGCACGCT GGGCGCCCGC
ATCGACGTGG TGGAAATGCT CGATGGCCTG ATGCAGGGCG CTGACCGCGA CCTCGTCAAG
GTGTGGGACA AGATGAACAA GAGCCGCTTC GACAAGGTCA TGCTCAAGAC CAAGACGGTC
GGGGTCGAGG CCAAGCCGGA CGGCATTTAC GTCAAGTTCG AGGGCGAAGC CGCACCTGCC
GAGCCGCAAC GCTATGACAT GGTGCTGGTG GCCGTGGGCC GCACCCCGAA CGGCAAGCGC
ATTGGCGCCG AGAAGGCCGG CGTGGCGGTG ACCGACCGTG GCTTCATCGA CGTGGATAAG
CAACAGCGCA CGAATGTGCC GCACATCTTC GCGATCGGCG ACCTCGTGGG GCAGCCGATG
CTGGCACACA AGGCCGTGCA TGAAGGTCAC GTGGCGGCAG AAGCCGCGCA CGGCGAGAAG
GCGTATTTCG ATGCCAAGCA GATTCCGTCG GTCGCCTATA CCGATCCGGA AGTGGCCTGG
GCAGGTCTGA CCGAAGACCA GTGCAAGGCG CAGGGCATCA AGTACGGCAA GGGCGTGTTC
CCGTGGGCCG CTTCGGGCCG CGCGATTGCC AACGGCCGCG ACGAAGGCTT CACGAAGTTG
ATCTTCGACG AGGAAACGCA CCGCATCATC GGTGGCGGCA TCGTTGGCAC GCACGCCGGC
GACTTGATCG GCGAAATCTG CCTGGCCATC GAGATGGGCG CGGACGCCGT GGACATCGGC
AAGACCATCC ACCCGCACCC GACGCTGGGT GAGTCGGTGG GCATGGCTGC GGAAATCTAC
GAGGGTGTTT GCACGGACGT GCCCCCGGCT CGTAAGCGAT GA
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| Protein sequence | MSVVEIKVPD IGDFDAVEVI EVLIKAGDTV APEQSLIVLE SDKASMEVPS EVAGKIVDVK
VKVGDKVSKG TVIATAEAGA AAAPGPAQAP APAPAPAAAP AASAPAPQAA KHAGGADIEC
EMLVLGSGPG GYSAAFRSAD LGMNTVLVER FSTLGGVCLN VGCIPSKALL HTAAVMDEVK
AMAAHGIVYS EPTVDINQLR KHKESVIGKL TGGLAGMAKA RKVQVVRGVG TFLDPNHLEV
QLTDGDGKAT TGEKKVIRFA KAIIAAGSEA VKLPFIPEDP RIVDSTGALE LREVPGRMLV
IGGGIIGLEM ATVYSTLGAR IDVVEMLDGL MQGADRDLVK VWDKMNKSRF DKVMLKTKTV
GVEAKPDGIY VKFEGEAAPA EPQRYDMVLV AVGRTPNGKR IGAEKAGVAV TDRGFIDVDK
QQRTNVPHIF AIGDLVGQPM LAHKAVHEGH VAAEAAHGEK AYFDAKQIPS VAYTDPEVAW
AGLTEDQCKA QGIKYGKGVF PWAASGRAIA NGRDEGFTKL IFDEETHRII GGGIVGTHAG
DLIGEICLAI EMGADAVDIG KTIHPHPTLG ESVGMAAEIY EGVCTDVPPA RKR
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