Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1942 |
Symbol | |
ID | 6288407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2048255 |
End bp | 2048836 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642625508 |
Product | phasin family protein |
Protein accession | YP_001899509 |
Protein GI | 187929022 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01841] phasin family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000889348 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00205341 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGACTC AGGAACAGAT CGCTGCGGCG CATAAGGCCA ACCTGGAAAC GTTCTTCGGC CTGACCAACA AGGCATTTGA AGGCGTCGAA AAGCTGGTCG AACTGAACCT GCAGGTCGTC AAGGCTACCC TGGCCGAGAA CGTCGAACAC GCCAAGAAGG CACTGACCGC CAAGGACGCC CAAGAGCTGC TGTCGGTGCA AACCGCCGCA GTGCAGCCGC TGGCTGAAAA GGTTCTGGCT TACAGCCGTC ACCTGTACGA AATCGCTTCG GACACGCAAA CTGAATTCAG CAAGGCTGCT GAAGCGCAAA TCGCTGAAAA CAGCCGCAAG CTGCAAGCGC TGGTCGACAA CGTGTCGAAG AACGCTCCGG CCGGTTCGGA ATCGGCAGTT GCCCTGGTGA AGTCGGCTCT GTCGGCCGCC AACAACGCTT ACGACTCGGT GCAGAAGGCC ACCAAGCAAG CTGTGGAACT GGCTGAAAGC AACTTCCACG CTGCTGCCAA CGCTGCCAGC AAGGCAACCG CTCAAGCATC GGCCCAAGCG CGCGCTGCCA CCGGCAAGAA GTCGGCAACG ACCGCTGCGT AA
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Protein sequence | MLTQEQIAAA HKANLETFFG LTNKAFEGVE KLVELNLQVV KATLAENVEH AKKALTAKDA QELLSVQTAA VQPLAEKVLA YSRHLYEIAS DTQTEFSKAA EAQIAENSRK LQALVDNVSK NAPAGSESAV ALVKSALSAA NNAYDSVQKA TKQAVELAES NFHAAANAAS KATAQASAQA RAATGKKSAT TAA
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