Gene Rpic_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1942 
Symbol 
ID6288407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2048255 
End bp2048836 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID642625508 
Productphasin family protein 
Protein accessionYP_001899509 
Protein GI187929022 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000889348 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00205341 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGACTC AGGAACAGAT CGCTGCGGCG CATAAGGCCA ACCTGGAAAC GTTCTTCGGC 
CTGACCAACA AGGCATTTGA AGGCGTCGAA AAGCTGGTCG AACTGAACCT GCAGGTCGTC
AAGGCTACCC TGGCCGAGAA CGTCGAACAC GCCAAGAAGG CACTGACCGC CAAGGACGCC
CAAGAGCTGC TGTCGGTGCA AACCGCCGCA GTGCAGCCGC TGGCTGAAAA GGTTCTGGCT
TACAGCCGTC ACCTGTACGA AATCGCTTCG GACACGCAAA CTGAATTCAG CAAGGCTGCT
GAAGCGCAAA TCGCTGAAAA CAGCCGCAAG CTGCAAGCGC TGGTCGACAA CGTGTCGAAG
AACGCTCCGG CCGGTTCGGA ATCGGCAGTT GCCCTGGTGA AGTCGGCTCT GTCGGCCGCC
AACAACGCTT ACGACTCGGT GCAGAAGGCC ACCAAGCAAG CTGTGGAACT GGCTGAAAGC
AACTTCCACG CTGCTGCCAA CGCTGCCAGC AAGGCAACCG CTCAAGCATC GGCCCAAGCG
CGCGCTGCCA CCGGCAAGAA GTCGGCAACG ACCGCTGCGT AA
 
Protein sequence
MLTQEQIAAA HKANLETFFG LTNKAFEGVE KLVELNLQVV KATLAENVEH AKKALTAKDA 
QELLSVQTAA VQPLAEKVLA YSRHLYEIAS DTQTEFSKAA EAQIAENSRK LQALVDNVSK
NAPAGSESAV ALVKSALSAA NNAYDSVQKA TKQAVELAES NFHAAANAAS KATAQASAQA
RAATGKKSAT TAA