Gene Rpic_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1934 
Symbol 
ID6286544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2039853 
End bp2041262 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content63% 
IMG OID642625500 
Productiron-sulfur cluster binding protein 
Protein accessionYP_001899501 
Protein GI187929014 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.628498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.020498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCC GCAGCATGGA ATTCAAAGCA CGCGCCGGGC AGAAGCTCGC CGACAAGCGC 
CTGCAGCAGA ACCTTACCAA GCTCTCGACC AAATTCGTCA CCGCACGCGC GGCAGCCATC
CAGGACATCG ATTTTCCGGC TACGCGTGAA GCGCTGAAGG AGCGCCGCAA CCGCGCGTTG
GAAAACCTCG ACGTCTGGCT CGCCACCTTC GAGGCGGAAG CGACGCGCCG TGGCGCCAAG
GTGCTGTTTG CCGAAACCAC GGCCGATGCC GCTCGCCTGG TCGCAGAGAT CGCCCGCCAG
CACGAGGTCA AGAAGGTCAT CAAGAGCAAG TCGATGGTGA CCGAAGAGAT GCGCCTGAAC
CAGGTGCTCG GCGAGATGGG CGTGCAGAGC ATCGAGACCG ATCTGGGTGA GTACATCCTG
CAGATCAACG ATAGCGAGCC GCCGTCGCAC ATTATTGCGC CGGTAGTGCA CAAGGATAAG
GAGGAGATTG CTGACCTCTT CGCCAAGACG CACAAGAAGC CGCGTCTGAC CGACATTCCC
GAGATGACGC GTGAGGCGCG CGAAGTGCTG CGGCCCGAGT TTCTGTCCGC TGACATGGGC
GTGACGGGCG GCAACTTCAT CATTGCCGAG ACGGGTTCCG TGGCGATCGT CACCAATGAG
GGCAACGAAG GCATGTGCAC GATCATGCCG CGCGTGCACG TTGCCGTGAC GGGCATCGAG
AAGGTGCTGC CGACGCTCGA GGATCTGGCG ACCGTCATGC GCTTGTTGCC GCGTTCGGCG
ACCGGACAAG CGATCTCGAA CTATTTCTCG CTGCTGACGG GCCCGCGCGC GCCCGGCGAG
AAGGATGGCC CAGAGCATAT GTACTTCGTC ATCGTCGACG GCGGCCGCAG TGGCCTGATC
GGCGGCGAAT TCCAGGAGAT GCTGCGCTGT ATCCGGTGCG GCGCGTGCAT GAACCACTGC
CCGGTCTATC AGAAGATCGG CGGCCATGCG TACGGCTGGG TGTATCCGGG CCCGATGGGC
AGCGTGCTGA CGCCGAGCTA CGTGGGGCTG TCGAACGCAC TGGACCTTCC GCAAGCGGCC
ACGCTGTGCG GTGAATGCAA TCGCGTGTGT CCTGCGTCCA TCCCGTTGTC GGATCTGTTG
CGTACGCTGC GCGAGAAGCA AATGGAGCGC GAATTGCGCC CGCAAGCGGA GCGCTTTGGC
TTGCGCGTGT GGGGCTTCAT GGCACGGCGA CCGGCGTTGT ACTCGGCCGG TACCTGGGTT
GCAGCGCGCG TGCTGCGTTG GATGGGCGGT GACAAGAAGC TGATCCACTC GCTGCCCGTC
GGAAAAGGCT GGACCGACAC ACGTGACATG CCGGCCCCAG CAGGCAAGAC GTTCCGCGAG
CTGTATCGTG AGAAGAAGGC CCGAGCATGA
 
Protein sequence
MQVRSMEFKA RAGQKLADKR LQQNLTKLST KFVTARAAAI QDIDFPATRE ALKERRNRAL 
ENLDVWLATF EAEATRRGAK VLFAETTADA ARLVAEIARQ HEVKKVIKSK SMVTEEMRLN
QVLGEMGVQS IETDLGEYIL QINDSEPPSH IIAPVVHKDK EEIADLFAKT HKKPRLTDIP
EMTREAREVL RPEFLSADMG VTGGNFIIAE TGSVAIVTNE GNEGMCTIMP RVHVAVTGIE
KVLPTLEDLA TVMRLLPRSA TGQAISNYFS LLTGPRAPGE KDGPEHMYFV IVDGGRSGLI
GGEFQEMLRC IRCGACMNHC PVYQKIGGHA YGWVYPGPMG SVLTPSYVGL SNALDLPQAA
TLCGECNRVC PASIPLSDLL RTLREKQMER ELRPQAERFG LRVWGFMARR PALYSAGTWV
AARVLRWMGG DKKLIHSLPV GKGWTDTRDM PAPAGKTFRE LYREKKARA