| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1910 |
|---|
| Symbol | |
|---|
| ID | 6289697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2014206 |
|---|
| End bp | 2015390 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642625474 |
|---|
| Product | beta-ketothiolase |
|---|
| Protein accession | YP_001899477 |
|---|
| Protein GI | 187928990 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.614831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0602088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTG AAGTGGTGGT GGTCAGCGGC GTTCGTACCG CAATCGGGAC GTTTGGCGGC
AGCTTGAAGG ATGTGGCGCC GTGCGAACTC GGCGCGCTCG TCGTGCGCGA GGCGCTGGCC
CGCGCCGGGG TGAAGGGCGA GGACGTCGGC CACGTGGTGT TTGGCCACGT GATCAACACC
GAGCCGCGCG ACATGTATCT CTCGCGTGTG GCCGCAGTCA ACGGCGGGGT GTCGGCCGAA
ACGCCCGCAT TCAACGTCAA CCGCCTGTGC GGCTCTGGCC TCCAGGCCGT GGTGAGCGCA
GCGCAAACCG TGCTGCTGGG CGATGCCGAT ATCGCCATTG CCGGTGGCGC GGAAAGCATG
AGCCGCGCGC CGTACCTGGC GCCTGCCGCC CGTTGGGGTT CGCGCATGGG CGACGCCAAG
ATGGTCGACA TGATGCTCGG CGCGCTGCAC GACCCGTTCC ACACGATCCA CATGGGTGTG
ACGGCGGAAA ACGTCGCCCG CGAATTCGGC ATCAGCCGCG AGCAGCAAGA TCAGACCGCG
CTGGAGTCCC ACCAGCGTGC ATCGCGTGCC ATCCAGGCCG GCTACTTCAA GGACCAGATC
GTTCCGGTGA CGATCAAGTC GCGCAAGGGC GATATCCAGT TCGATACCGA TGAGCACGTC
CGCCACGACG CGACCATCGA CGACATGACC AAGCTCAAGC CGGTCTTCAC GAAAGAAAAC
GGTACGGTGA CGGCGGGCAA CGCTTCGGGC CTCAACGATG CAGGCGCGGC GCTGGTGCTG
ATGGAGCGTT CGGTGGCCGA AAAGCGCGGC CTCAAGCCAC TGGCCCGGCT GGTGTCGTAC
GGCCATGCGG GCGTGGATCC GAAGATCATG GGTATCGGCC CGGTGCCGGC CACGCGCAAG
GCGCTGGAGC GGGCAGGCCT GTCGGTCAAG GATCTGGATG TGATCGAAGC CAACGAGGCA
TTTGCCGCCC AGGCTTGTGC GGTGACGAAG GAACTCGGCC TGGACCCGGC CAAGGTCAAC
CCAAACGGTT CGGGCATTTC GCTCGGCCAC CCGATCGGCG CAACGGGTGC GCTTATCACG
GTCAAGGCGT TGCACGAGCT GCAGCGCATC GGTGGTCGCT ACGCGCTGGT GACCATGTGT
ATTGGTGGAG GACAGGGCAT TGCGGCGGTG TTCGAGCGCA TCTGA
|
|---|
| Protein sequence | MAREVVVVSG VRTAIGTFGG SLKDVAPCEL GALVVREALA RAGVKGEDVG HVVFGHVINT
EPRDMYLSRV AAVNGGVSAE TPAFNVNRLC GSGLQAVVSA AQTVLLGDAD IAIAGGAESM
SRAPYLAPAA RWGSRMGDAK MVDMMLGALH DPFHTIHMGV TAENVAREFG ISREQQDQTA
LESHQRASRA IQAGYFKDQI VPVTIKSRKG DIQFDTDEHV RHDATIDDMT KLKPVFTKEN
GTVTAGNASG LNDAGAALVL MERSVAEKRG LKPLARLVSY GHAGVDPKIM GIGPVPATRK
ALERAGLSVK DLDVIEANEA FAAQACAVTK ELGLDPAKVN PNGSGISLGH PIGATGALIT
VKALHELQRI GGRYALVTMC IGGGQGIAAV FERI
|
|---|
| |