| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1902 |
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| Symbol | ispF |
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| ID | 6287754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2004026 |
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| End bp | 2004532 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625466 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001899469 |
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| Protein GI | 187928982 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.207923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGGA TGGACATCCG CATTGGTCAA GGCTATGACG TGCACGCGCT GGTGGAGGGC
CGCAAGCTGA TCCTGGGCGG CGTGGAGATT CCGCACACAC GCGGTCTGCT CGGCCACTCC
GACGCCGATG CGCTGCTGCA TGCGATTACC GATGCATTGT TCGGCGCCGC CGGCCTGGGC
GACATCGGCC GGCACTTTCC CGACACCGAC CCGGCCTTTG CCGGCGCCGA CAGCCGCGTG
CTGCTGCGCG AAGCCGTGCG CCGCGTGCAC AAGGCCGGTT ATGCGGTCGG CAATGTCGAC
GCCACCGTCA TCGCGCAGAA GCCCAAACTC GCACCACATG TGCCTGGCAT GGTTGCCAAC
TTAGCGGAAG ACCTCGGCAT TGCGCCCGAG CGGTGCAACG TCAAGGCCAA AACGAACGAG
AAGCTCGGCT TCGAAGGCAA GGAGGAAGGC ATCGTCGCGC AGGCGGTGGT GTTGATCTAT
CGCGCAGAAG CCGCCGAGCA GGACTAA
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| Protein sequence | MNWMDIRIGQ GYDVHALVEG RKLILGGVEI PHTRGLLGHS DADALLHAIT DALFGAAGLG
DIGRHFPDTD PAFAGADSRV LLREAVRRVH KAGYAVGNVD ATVIAQKPKL APHVPGMVAN
LAEDLGIAPE RCNVKAKTNE KLGFEGKEEG IVAQAVVLIY RAEAAEQD
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