| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1865 |
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| Symbol | |
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| ID | 6287184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1962785 |
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| End bp | 1964725 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625427 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001899433 |
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| Protein GI | 187928946 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.721225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000258425 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGATT TCGTACGTAC GCATCGGCGC TTGATGTTTC TGGTGCTGCT GATTCTGGTG
TTCCCGTCGT TCGTGTTCTT CGGCGTGCAG AGCTATTCGA GCTTCATGGA CAGCTCGCAT
GACGCCGCCA AGGTCGACGG CAAAGTCATC TCGACCAACG AAGTCGACGC GCGCGTGCGC
GAGCAGACCG AGCGCCTGCG CCAGATGCTT GGCGCGCAAT ATGATCCGCG CCAGTTCGAA
GGTCCACAGA TGCGCCGCGA CGTGCTCGAC GGCATCATTC AGCAACGCGT GCTGGCCAAT
GAAGTCGTGC GTGCGAACCT GACCATCTCG AACGAGAAGA TTCGCGACAC GATCCTGCAG
ATTCCGGCCG TGGCGGCGCT GCGCAAGCCG GATGGCTCCT TCGATCAGGA AGCCTACGTA
CGGCTGCTGT CTGCGCAGAA CATGACGCCC GAGCAGTTGG AAGGCAATCT GCGCTTCGAG
CTCTCGCAGC AGCAGATTCC GCAATCGATC GTGTCGTCGG CGTTTGTGCC GAAGTCGCTG
GTGGAGCGCC TCATCCAGGT ACGCGATCAG CAACGCGAAG TTCAGACACT GCTGTTCAAG
CCGGCCGACT ACGCTGCAAA GGTCAATGCG GACGACAAGG CCATCCAGGC TTACTACGAC
GCGCACCAGC AGGAATTCTC TGTTCCGGAG CAAGTCAAGG CCGAGTATGT CGTGTTCTCG
GGCGAAGAGA TGATGAAGCA GATTCCGGTC ACGCCCGAGC AGATCAAGGA GTACTACGAT
CAGAACGCTG CGCGCTTCAA GACACAGGAA GAACGCCGCG CCGCTCACAT CCTGATCAAG
CTGCCGGATA ACGCCAAGCC TGCCGACAAG GAAGCCGCCA AGAAGAAGGC CGAAGAAGTC
TTGGCCGAGG TGCGCAAGAA TCCCGCGAGC TTTGCCGAGC TTGCCAAGAA GTACTCGGGT
GATCCAGGCT CGGCCGCGCA GGGTGGCGAG CTGGGCTTCC TCGGCAAGGG CGCGACTGTG
CCGCCGTTCG AGAACGCGCT GTTTGCGCTC AAGCAGCCGG GCGACATCAG TGACGTGGTC
CAAAGCGATT TTGGTTTCCA CATCATCAAG CTGGAAGAAG TGAAGGGCGG CGGCGTGCAG
CCCTTGGAAG CCGTGAAGCC TGAGCTTGAA CGCGAACTGC GTACGCAACT CGCGAACAAG
AAGTACTCGG AGCTGGCCGA TGCGTTCTCC AACACGGTGG AAGATCAGTC CGACAGCCTG
AAGCCGGTGG CTGACAAGCT CAAGCTGCAG ATCCAGACGA CCGACAACGT AACCCGCACC
CCGAGCCCGG CGCAGTCCGG CAGCCCCATC GGCAACGACA AGGTGCTCAA GGCGCTGTTC
GCTGACGACG TGATCAAGAA TCACCGCAAT ACGGCCGCCA TCCAAGTGGG CCCGACCACG
CTGGTTGCAG CGCGCGCGGC GGAGTACCGC CCGGCCACGG TGAAGAAGCT GGCCGACGTG
CGTGAACAGG TCAAGGCCAA GGTGATCGCC GAGCAAGCGG CTGCGCTGGC CAAGAAGGCT
GGCGAAGAGA AGCTTGCCGC CGTGAAGCAG AGCAACAGCG CCGATGGCTT CGGTGCTGCA
CAGACGGTCT CGCGCCAGCA GGCGCAGGGC ACGCCGCCGG CTGCACTGAC AGCCATCCTG
CGCGCGGATG CGACCAAGCT GCCGACCACC ATTGGTGTCG ACCTGGGTCC CCAGGGCTAC
GCGCTGTATC GCATCAACAA GGTGCTGCCG CCGGCCAATG TGGACGAGAC GCGCCGTGCT
GCCGATGCAC AACAACTGGC TCAGGCCGCT GGTCAGACCG AGTTCAACGC CTACTATGAA
GCACTGAAGG CGCGCTCGAA GGTGAAGATC AACAGCAGCG CGGTCGACAG CAGTAAGCCA
GCCAATACGG CAGAGGACTG A
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| Protein sequence | MLDFVRTHRR LMFLVLLILV FPSFVFFGVQ SYSSFMDSSH DAAKVDGKVI STNEVDARVR
EQTERLRQML GAQYDPRQFE GPQMRRDVLD GIIQQRVLAN EVVRANLTIS NEKIRDTILQ
IPAVAALRKP DGSFDQEAYV RLLSAQNMTP EQLEGNLRFE LSQQQIPQSI VSSAFVPKSL
VERLIQVRDQ QREVQTLLFK PADYAAKVNA DDKAIQAYYD AHQQEFSVPE QVKAEYVVFS
GEEMMKQIPV TPEQIKEYYD QNAARFKTQE ERRAAHILIK LPDNAKPADK EAAKKKAEEV
LAEVRKNPAS FAELAKKYSG DPGSAAQGGE LGFLGKGATV PPFENALFAL KQPGDISDVV
QSDFGFHIIK LEEVKGGGVQ PLEAVKPELE RELRTQLANK KYSELADAFS NTVEDQSDSL
KPVADKLKLQ IQTTDNVTRT PSPAQSGSPI GNDKVLKALF ADDVIKNHRN TAAIQVGPTT
LVAARAAEYR PATVKKLADV REQVKAKVIA EQAAALAKKA GEEKLAAVKQ SNSADGFGAA
QTVSRQQAQG TPPAALTAIL RADATKLPTT IGVDLGPQGY ALYRINKVLP PANVDETRRA
ADAQQLAQAA GQTEFNAYYE ALKARSKVKI NSSAVDSSKP ANTAED
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