Gene Rpic_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1855 
Symbol 
ID6286290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1946746 
End bp1947306 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID642625417 
Producthypothetical protein 
Protein accessionYP_001899423 
Protein GI187928936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00770378 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000348752 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATACAC GATTATTTGC TTTCGTCGGC GCAGACATTG GCCCTTGGCG GATTGTCAGG 
GCCGAAACGA GAGTTGGCGA GCCCCTGCCT GAAGCCAAAA GGCTCAACGT CGTATCCGCT
TCAGAGTTGC AGTCTGAAAC CAATGCACCC TGGATACTTC GTGGAATAAC CAGCAATGAA
CGATATGTCA TGCGCGCAGA GAAGAATGAA ATTGTAGCGA AGCAGCAAGG TCTGGCGCGC
CCAGAAGCAA CGTGCGGTGC GCTAATACCG ATCCGGAAGA ACGCAGCTTG GTGGGAGCTC
ACGCAAGACG AACGCCGGAG CGTTTTCGAA CAGTCGAAGC ACGTCCAAAT CGGGCTTCAG
TATTTGCCTG CAGTAGCGCG CAAGCTCCAC CACTGCCGCG ACCTCTCAGA GAATGAACCG
TTCGATTTTC TGAATTGGTT CGAATACGCG CCAATTCATG AGGTTGAGTT CAACAGGCTG
CTTTCCGAAC TGCGTGCGTC AGAGGAATGG AAATACGTCG ACCGAGAAGT CGATATTCGT
CTTACGCAAG CACAGGTCTA A
 
Protein sequence
MDTRLFAFVG ADIGPWRIVR AETRVGEPLP EAKRLNVVSA SELQSETNAP WILRGITSNE 
RYVMRAEKNE IVAKQQGLAR PEATCGALIP IRKNAAWWEL TQDERRSVFE QSKHVQIGLQ
YLPAVARKLH HCRDLSENEP FDFLNWFEYA PIHEVEFNRL LSELRASEEW KYVDREVDIR
LTQAQV