| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1809 |
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| Symbol | |
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| ID | 6287308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1900312 |
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| End bp | 1903482 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625372 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001899378 |
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| Protein GI | 187928891 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.642799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.564558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC GGCTGATTCT CGCGTCCATC CGCAACCGCT TCCTGATCCT GCTGGCGACG
CTGATGTTGA CCGCGTGGGG ATTGTGGGCC GTCCGCAGCA CCCCGCTCGA TGCGCTGCCC
GACCTGTCGG ACGTGCAAGT CATCATCCGC ACACCGTTCC CCGGCCAAGC GCCGCAGATC
GTGGAGAACC AGGTCACCTA TCCACTGACC ACCACTATGC TGTCGGTGCC AGGTGCCAAG
ACGGTGCGCG GCTACTCGTT CTTTGGCGAC TCCTTCGTCT ATGTGCTGTT CGAGGACGGA
ACCGACCTGT ATTGGGCCCG TTCACGGGTG CTGGAGTATC TGAACCAGGT GCAATCCCGC
CTGCCGGCTG CCGCCAAGCC TGCGCTGGGC CCGGATGCCA CCGGCGTGGG CTGGATCTAC
GAGTATGCAT TGGTGGACAA GACCGGCCAG CACGACCTCA GTCAACTGCG CGCGCTGCAG
GACTGGTTCC TGCGCTTCGA ACTCAAATCG CTGCCCAACG TCGCCGAGGT GGCATCGCTC
GGCGGGATGG TCAAGCAATT CCAGGTCGTC CTGATGCCGG ATCGCCTGCG GGCATATAAC
CTGTCCCAGG CTAAGGTGCT GGCCGCACTC AAGGCGGCCA ACCAGGAGAC TGGCGGCTCG
GTGCTGGAGC TGGGCGAGGC CGAATACATG GTCCGCGCCA GCGGCTATCT GAAGACACTG
GACGACTTCC GGCAGATTCC GCTGACGACG AGCGACGCAG GCATCGCCGT TCGCCTGGGC
GATGTCGCCA CCCTCCAGCT CGGACCGGAG ATGCGGCGAG GCATTGCCGA TCTCAACGGC
CAAGGTGAAG TCGCCGGCGG CGTCATCGTG ATGCGCTCCG GAAAGAACGC GCTGGAGACC
ATCGAAGCGG TCAAGGCCAA GCTCGCCACG CTGCAGAAGA GCTTGCCGGC CGGCGTCGAA
ATCGTGCCGA CCTACGACCG TTCCGCGCTG ATCAACCGCG CGGTGGAGAA CCTGACGCAC
AAGCTGATCG AGGAATTCAT CGTCGTCGCG CTGGTGTGCC TGGTGTTCCT GTTCCACCTG
CGCTCAGCGC TGGTGGCGAT CGTGTCGCTG CCGCTGGGCG TGCTCGCTGC CTTCCTGGTG
ATGCGGTACC AAGGCGTCAA TGCCAACATC ATGTCGCTGG GCGGCATTGC CATCGCCGTC
GGTGCCATGG TCGACGCCGC CGTGGTCATG ATCGAGAACG CGCACAAGCA CCTGGAACAT
TGGCATGCGG ACAATCCCGG ACGGGAGCTG GCCGGGCACG AGCGCTGGAG CGTGATCGGC
GAATCCGCGG CGGAAGTGGG CCCGGCGCTG TTCTTCTCGC TGCTGATCAT CACGCTGTCG
TTCATCCCGG TGTTCACGCT GGAGGCACAG GAAGGCCGGC TGTTCTCGCC GCTGGCCTTC
ACCAAGACCT ACTCGATGGC CGCCGCCGCG GGGCTGTCGG TCACATTGGT GCCAGTCCTG
ATGGGCTACC TGATCCGCGG GCGCATCCCA ACCGAGCAAT CGAATCCGCT TAGCCGCTGG
CTGATTCGGC TTTATCAACC GGTGTTGGCC AGGGTGCTCG CGTATCCCAA AGCGACGGTT
GTCATCGCCG CCGTGCTGCT GGCGGCCACG GCCTGGCCGA TCCTGCGCAC GGGCGGTGAG
TTCATGCCGC CGCTGGATGA GGGCGACCTG CTGTACATGC CATCGGCACT GCCGGGGCTC
TCTGCCGGCA AGGCGGCCCA ACTGTTACAG CAGACCGACC GTCTCATCAA GACCGTCCCG
GAGGTCGCCA GCGTGTTCGG CAAGGCAGGC CGCGCCGATA CCGCCACCGA CCCGGCGCCC
ATCGAGATGT TCGAGACCAC CATCCAGTTC AAACCGCGCG ACCAGTGGCG ACCCGGCATG
ACGACCGACA AGCTGGTGGA AGAGCTGGAC CGCGTGGTCA AGGTGCCGGG CCTCTCCAAT
ATCTGGGTGC CGCCCATCCG CAACCGGATC GACATGCTCG CCACCGGCAT CAAGAGCCCG
GTCGGCATCA AGGTGGCGGG CACGGACCTC AAGGAGATCG ACCGACTGAC CACTCGGATC
GAGGAGGCAG TCAAGACCGT ACCGGGGGTC ACGTCTGCGC TGGCCGAACG CCTGTCCGGC
GGGCGCTACG TCGACGTCGA TATCGACCGG ATGGCTGCAG GGCGATACGG CCTCAATATC
GAAGATGTGC AGAGCATCGT GTCGTCAGCT GTAGGGGGAG ACAACGTGGG TGAAGTCGTG
GATGGCTTGG CACGGTTCCC CATCAACGTC CGTTACCCAC GGGACTATCG CGACTCGGTC
GAGCAACTGC GCAGCCTGCC TATCGTCACC GACCGCGGCC AGCAGATCAC GCTGGCCGAT
GTGGCCCGTA TCCAGGTTGT GCAGGGGCCG CCGATGTTGC GCAGCGAGAA CGCCCGGCTT
TCTGGCTGGG TGTATGTGGA TATCCGAGGG CGCGATCTGC GCTCGGCGGT GCAGGACATG
CAGGCGGCCG TGGCCAAGGC GGTGCCGATG CCGGCAGGCT ACGCGCTGAG CTGGTCCGGT
CAGTTCGAGT ACCTGGAGCG TGCCAGCGCC AAGCTGAAGG TGGTGGTGCC GTTCACCCTG
CTGATCATCT TCGTGCTGCT GTACCTCGTG TTCGGCCGCA TCGACGAGGC GCTGCTCATC
ATGGGCACGC TGCCGCTGGC GCTGATCGGC GGTTTCTGGC TGCTGTACCT GCTGGGCTAC
AACTTGTCGG TGGCCGGGAT CGTCGGCTTT ATCGCGCTGG CCGGCGTGGC GGCCGAGTTC
GGCGTGATCA TGCTGCTCTA CCTCAAGCAA GCATGGTCGG AGCGGCAGGA GGCCGGCCGG
GACACGCCCC AAGCGTTACT GGAAGCCATT CAGGAAGGCG CCGTCCTGCG GGTGCGCCCA
AAGGCCATGA CGGTCGCCGT CATCCTAGCC GGCCTGATCC CAATCATGTG GGCGCACGGC
ACCGGTTCCG AGATCATGCA GCGCATTGCA GCACCGATGG TCGGTGGCAT GGTCACTGCG
CCCTTACTTT CCCTGTTCGT CGTCCCAGCC GTGTATCTGC TGATCCGCCG GCGGCAGACG
AAATCATCAC CGCTTCCCAC CCACCCCTCA CATCAAGAGG AATCACCATG A
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| Protein sequence | MIARLILASI RNRFLILLAT LMLTAWGLWA VRSTPLDALP DLSDVQVIIR TPFPGQAPQI
VENQVTYPLT TTMLSVPGAK TVRGYSFFGD SFVYVLFEDG TDLYWARSRV LEYLNQVQSR
LPAAAKPALG PDATGVGWIY EYALVDKTGQ HDLSQLRALQ DWFLRFELKS LPNVAEVASL
GGMVKQFQVV LMPDRLRAYN LSQAKVLAAL KAANQETGGS VLELGEAEYM VRASGYLKTL
DDFRQIPLTT SDAGIAVRLG DVATLQLGPE MRRGIADLNG QGEVAGGVIV MRSGKNALET
IEAVKAKLAT LQKSLPAGVE IVPTYDRSAL INRAVENLTH KLIEEFIVVA LVCLVFLFHL
RSALVAIVSL PLGVLAAFLV MRYQGVNANI MSLGGIAIAV GAMVDAAVVM IENAHKHLEH
WHADNPGREL AGHERWSVIG ESAAEVGPAL FFSLLIITLS FIPVFTLEAQ EGRLFSPLAF
TKTYSMAAAA GLSVTLVPVL MGYLIRGRIP TEQSNPLSRW LIRLYQPVLA RVLAYPKATV
VIAAVLLAAT AWPILRTGGE FMPPLDEGDL LYMPSALPGL SAGKAAQLLQ QTDRLIKTVP
EVASVFGKAG RADTATDPAP IEMFETTIQF KPRDQWRPGM TTDKLVEELD RVVKVPGLSN
IWVPPIRNRI DMLATGIKSP VGIKVAGTDL KEIDRLTTRI EEAVKTVPGV TSALAERLSG
GRYVDVDIDR MAAGRYGLNI EDVQSIVSSA VGGDNVGEVV DGLARFPINV RYPRDYRDSV
EQLRSLPIVT DRGQQITLAD VARIQVVQGP PMLRSENARL SGWVYVDIRG RDLRSAVQDM
QAAVAKAVPM PAGYALSWSG QFEYLERASA KLKVVVPFTL LIIFVLLYLV FGRIDEALLI
MGTLPLALIG GFWLLYLLGY NLSVAGIVGF IALAGVAAEF GVIMLLYLKQ AWSERQEAGR
DTPQALLEAI QEGAVLRVRP KAMTVAVILA GLIPIMWAHG TGSEIMQRIA APMVGGMVTA
PLLSLFVVPA VYLLIRRRQT KSSPLPTHPS HQEESP
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