| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1794 |
|---|
| Symbol | |
|---|
| ID | 6287145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1888639 |
|---|
| End bp | 1889244 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642625357 |
|---|
| Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_001899363 |
|---|
| Protein GI | 187928876 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.452271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.628194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CAAGCGTTGA TTCCCGAACC GTGCGCCAGC GCAGATTGCT TCTGCTGGCC
ACCGGCACCG TAGGTGGTGT GGGACTGGCC GGCGCCACGC TGCCATTCGT CGCGAGCATG
GCGCCGAGCC GCGCCGCGAG ATCGAAGGGA GCCCCAGTCG AGGTGAACCT CGATTCTGTT
GAGCCCGGTG CTCTGGTTAC CGTCGCTTGG CGCGGTAAGC CCGTTTGGAT TTTGCACCGT
ACCCGCGACA TGCTGGATCG TCTAGGCACA CACGACAATC TGTTGGGCGA TCCGCGATCC
AAAGAAGATC AACAGCCGGC CTATGCACGC AACGCGACAC GCTCCCTTCG GCCTGACTAC
TTTGTGGCAG TAGGCATCTG CACGCATCTT GGCTGCATAC CGAATTATCG GCCGGAAGTC
GGCGCCCCAG ATTTGGGCGA TCACTGGCCT GGTGGCTTTT TTTGCCCTTG CCATGGTTCC
AAATTCGATC TGGCCGGGCG AGTGTTCCTC AATGTTCCGG CGCCGCTCAA CCTGGAGATC
CCCCCGTACC AGTACCTGGA CAACACCCGC CTGATAGTCG GCGAGGATCG CTTTGGAGCC
AGATGA
|
|---|
| Protein sequence | MSKPSVDSRT VRQRRLLLLA TGTVGGVGLA GATLPFVASM APSRAARSKG APVEVNLDSV
EPGALVTVAW RGKPVWILHR TRDMLDRLGT HDNLLGDPRS KEDQQPAYAR NATRSLRPDY
FVAVGICTHL GCIPNYRPEV GAPDLGDHWP GGFFCPCHGS KFDLAGRVFL NVPAPLNLEI
PPYQYLDNTR LIVGEDRFGA R
|
|---|
| |